Protein–RNA interactions for Protein: Q9CYZ8

Ssbp2, Single-stranded DNA-binding protein 2, mousemouse

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssbp2Q9CYZ8 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC20.92■□□□□ 0.94
Ssbp2Q9CYZ8 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Ssbp2Q9CYZ8 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
Ssbp2Q9CYZ8 Gm26115-201ENSMUST00000175605 87 ntBASIC20.89■□□□□ 0.93
Ssbp2Q9CYZ8 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Ssbp2Q9CYZ8 Gm8109-201ENSMUST00000194076 746 ntBASIC20.88■□□□□ 0.93
Ssbp2Q9CYZ8 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Ssbp2Q9CYZ8 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Ssbp2Q9CYZ8 AC166822.3-201ENSMUST00000227394 661 ntBASIC20.84■□□□□ 0.93
Ssbp2Q9CYZ8 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.93
Ssbp2Q9CYZ8 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Ssbp2Q9CYZ8 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC20.82■□□□□ 0.92
Ssbp2Q9CYZ8 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Ssbp2Q9CYZ8 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
Ssbp2Q9CYZ8 AC153504.1-201ENSMUST00000218379 2290 ntBASIC20.8■□□□□ 0.92
Ssbp2Q9CYZ8 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Ssbp2Q9CYZ8 Gm6658-202ENSMUST00000209493 1885 ntBASIC20.77■□□□□ 0.92
Ssbp2Q9CYZ8 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Ssbp2Q9CYZ8 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Ssbp2Q9CYZ8 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Ssbp2Q9CYZ8 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Ssbp2Q9CYZ8 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
Ssbp2Q9CYZ8 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Ssbp2Q9CYZ8 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Ssbp2Q9CYZ8 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Ssbp2Q9CYZ8 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Ssbp2Q9CYZ8 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Ssbp2Q9CYZ8 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Ssbp2Q9CYZ8 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Ssbp2Q9CYZ8 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Ssbp2Q9CYZ8 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Ssbp2Q9CYZ8 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
Ssbp2Q9CYZ8 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Ssbp2Q9CYZ8 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Ssbp2Q9CYZ8 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Ssbp2Q9CYZ8 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ssbp2Q9CYZ8 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ssbp2Q9CYZ8 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Ssbp2Q9CYZ8 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Ssbp2Q9CYZ8 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC20.56■□□□□ 0.88
Ssbp2Q9CYZ8 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Ssbp2Q9CYZ8 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Ssbp2Q9CYZ8 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Ssbp2Q9CYZ8 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Ssbp2Q9CYZ8 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Ssbp2Q9CYZ8 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Ssbp2Q9CYZ8 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
Ssbp2Q9CYZ8 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Ssbp2Q9CYZ8 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Ssbp2Q9CYZ8 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Ssbp2Q9CYZ8 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Ssbp2Q9CYZ8 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Ssbp2Q9CYZ8 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Ssbp2Q9CYZ8 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Ssbp2Q9CYZ8 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC20.5■□□□□ 0.87
Ssbp2Q9CYZ8 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC20.5■□□□□ 0.87
Ssbp2Q9CYZ8 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Ssbp2Q9CYZ8 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Ssbp2Q9CYZ8 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Ssbp2Q9CYZ8 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Ssbp2Q9CYZ8 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC20.47■□□□□ 0.87
Ssbp2Q9CYZ8 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC20.47■□□□□ 0.87
Ssbp2Q9CYZ8 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Ssbp2Q9CYZ8 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Ssbp2Q9CYZ8 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
Ssbp2Q9CYZ8 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Ssbp2Q9CYZ8 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Ssbp2Q9CYZ8 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC20.43■□□□□ 0.86
Ssbp2Q9CYZ8 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Ssbp2Q9CYZ8 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Ssbp2Q9CYZ8 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
Ssbp2Q9CYZ8 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC20.41■□□□□ 0.86
Ssbp2Q9CYZ8 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Ssbp2Q9CYZ8 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Ssbp2Q9CYZ8 Peli2-204ENSMUST00000226513 1320 ntBASIC20.38■□□□□ 0.85
Ssbp2Q9CYZ8 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Ssbp2Q9CYZ8 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
Ssbp2Q9CYZ8 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Ssbp2Q9CYZ8 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC20.35■□□□□ 0.85
Ssbp2Q9CYZ8 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
Ssbp2Q9CYZ8 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Ssbp2Q9CYZ8 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
Ssbp2Q9CYZ8 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Ssbp2Q9CYZ8 Gm24804-201ENSMUST00000174982 85 ntBASIC20.32■□□□□ 0.84
Ssbp2Q9CYZ8 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
Ssbp2Q9CYZ8 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Ssbp2Q9CYZ8 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Ssbp2Q9CYZ8 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
Ssbp2Q9CYZ8 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Ssbp2Q9CYZ8 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Ssbp2Q9CYZ8 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC20.28■□□□□ 0.84
Ssbp2Q9CYZ8 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Ssbp2Q9CYZ8 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Ssbp2Q9CYZ8 Gm6206-201ENSMUST00000133472 2199 ntBASIC20.26■□□□□ 0.83
Ssbp2Q9CYZ8 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Ssbp2Q9CYZ8 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Ssbp2Q9CYZ8 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Ssbp2Q9CYZ8 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC20.24■□□□□ 0.83
Ssbp2Q9CYZ8 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Ssbp2Q9CYZ8 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC20.23■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 23.2 ms