Protein–RNA interactions for Protein: Q9CWS1

Rnf135, E3 ubiquitin-protein ligase RNF135, mousemouse

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf135Q9CWS1 AC153504.1-201ENSMUST00000218379 2290 ntBASIC27.18■■□□□ 1.94
Rnf135Q9CWS1 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
Rnf135Q9CWS1 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC27.16■■□□□ 1.94
Rnf135Q9CWS1 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.94
Rnf135Q9CWS1 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC27.13■■□□□ 1.93
Rnf135Q9CWS1 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC27.12■■□□□ 1.93
Rnf135Q9CWS1 Mipep-204ENSMUST00000225043 1548 ntBASIC27.1■■□□□ 1.93
Rnf135Q9CWS1 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC27.09■■□□□ 1.93
Rnf135Q9CWS1 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
Rnf135Q9CWS1 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC27.08■■□□□ 1.93
Rnf135Q9CWS1 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC27.07■■□□□ 1.92
Rnf135Q9CWS1 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC27.07■■□□□ 1.92
Rnf135Q9CWS1 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC27.07■■□□□ 1.92
Rnf135Q9CWS1 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC27.06■■□□□ 1.92
Rnf135Q9CWS1 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC27.04■■□□□ 1.92
Rnf135Q9CWS1 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC27.03■■□□□ 1.92
Rnf135Q9CWS1 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC27.03■■□□□ 1.92
Rnf135Q9CWS1 Gm27322-201ENSMUST00000184007 104 ntBASIC27.02■■□□□ 1.92
Rnf135Q9CWS1 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC27.01■■□□□ 1.92
Rnf135Q9CWS1 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC27.01■■□□□ 1.91
Rnf135Q9CWS1 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC26.98■■□□□ 1.91
Rnf135Q9CWS1 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC26.98■■□□□ 1.91
Rnf135Q9CWS1 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC26.97■■□□□ 1.91
Rnf135Q9CWS1 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC26.97■■□□□ 1.91
Rnf135Q9CWS1 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC26.96■■□□□ 1.91
Rnf135Q9CWS1 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
Rnf135Q9CWS1 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC26.93■■□□□ 1.9
Rnf135Q9CWS1 Gm24804-201ENSMUST00000174982 85 ntBASIC26.92■■□□□ 1.9
Rnf135Q9CWS1 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC26.92■■□□□ 1.9
Rnf135Q9CWS1 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
Rnf135Q9CWS1 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC26.91■■□□□ 1.9
Rnf135Q9CWS1 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
Rnf135Q9CWS1 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC26.87■■□□□ 1.89
Rnf135Q9CWS1 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
Rnf135Q9CWS1 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
Rnf135Q9CWS1 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC26.86■■□□□ 1.89
Rnf135Q9CWS1 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC26.85■■□□□ 1.89
Rnf135Q9CWS1 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC26.85■■□□□ 1.89
Rnf135Q9CWS1 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.89
Rnf135Q9CWS1 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
Rnf135Q9CWS1 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC26.79■■□□□ 1.88
Rnf135Q9CWS1 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
Rnf135Q9CWS1 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC26.76■■□□□ 1.87
Rnf135Q9CWS1 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC26.74■■□□□ 1.87
Rnf135Q9CWS1 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
Rnf135Q9CWS1 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC26.73■■□□□ 1.87
Rnf135Q9CWS1 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.87
Rnf135Q9CWS1 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
Rnf135Q9CWS1 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
Rnf135Q9CWS1 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC26.68■■□□□ 1.86
Rnf135Q9CWS1 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC26.68■■□□□ 1.86
Rnf135Q9CWS1 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
Rnf135Q9CWS1 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC26.67■■□□□ 1.86
Rnf135Q9CWS1 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
Rnf135Q9CWS1 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC26.65■■□□□ 1.86
Rnf135Q9CWS1 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
Rnf135Q9CWS1 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC26.65■■□□□ 1.86
Rnf135Q9CWS1 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
Rnf135Q9CWS1 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
Rnf135Q9CWS1 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
Rnf135Q9CWS1 AC166822.3-201ENSMUST00000227394 661 ntBASIC26.62■■□□□ 1.85
Rnf135Q9CWS1 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
Rnf135Q9CWS1 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
Rnf135Q9CWS1 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
Rnf135Q9CWS1 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
Rnf135Q9CWS1 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC26.58■■□□□ 1.85
Rnf135Q9CWS1 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC26.57■■□□□ 1.84
Rnf135Q9CWS1 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
Rnf135Q9CWS1 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
Rnf135Q9CWS1 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC26.55■■□□□ 1.84
Rnf135Q9CWS1 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
Rnf135Q9CWS1 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC26.54■■□□□ 1.84
Rnf135Q9CWS1 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
Rnf135Q9CWS1 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
Rnf135Q9CWS1 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
Rnf135Q9CWS1 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC26.5■■□□□ 1.83
Rnf135Q9CWS1 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
Rnf135Q9CWS1 Gm6206-201ENSMUST00000133472 2199 ntBASIC26.5■■□□□ 1.83
Rnf135Q9CWS1 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC26.49■■□□□ 1.83
Rnf135Q9CWS1 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC26.47■■□□□ 1.83
Rnf135Q9CWS1 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
Rnf135Q9CWS1 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
Rnf135Q9CWS1 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC26.46■■□□□ 1.83
Rnf135Q9CWS1 Zxda-201ENSMUST00000117281 2621 ntBASIC26.45■■□□□ 1.82
Rnf135Q9CWS1 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC26.44■■□□□ 1.82
Rnf135Q9CWS1 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC26.44■■□□□ 1.82
Rnf135Q9CWS1 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
Rnf135Q9CWS1 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC26.41■■□□□ 1.82
Rnf135Q9CWS1 Gm9905-201ENSMUST00000065740 1845 ntBASIC26.41■■□□□ 1.82
Rnf135Q9CWS1 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC26.41■■□□□ 1.82
Rnf135Q9CWS1 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC26.39■■□□□ 1.82
Rnf135Q9CWS1 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
Rnf135Q9CWS1 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
Rnf135Q9CWS1 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC26.37■■□□□ 1.81
Rnf135Q9CWS1 Zfp131-205ENSMUST00000223812 663 ntBASIC26.35■■□□□ 1.81
Rnf135Q9CWS1 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
Rnf135Q9CWS1 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
Rnf135Q9CWS1 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC26.33■■□□□ 1.81
Rnf135Q9CWS1 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
Rnf135Q9CWS1 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
Retrieved 100 of 76,532 protein–RNA pairs in 24.1 ms