Protein–RNA interactions for Protein: Q91Y16

Pcdha3, Protocadherin alpha 3, mousemouse

Predictions only

Length 942 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha3Q91Y16 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC27.44■■□□□ 1.98
Pcdha3Q91Y16 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC27.43■■□□□ 1.98
Pcdha3Q91Y16 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC27.36■■□□□ 1.97
Pcdha3Q91Y16 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
Pcdha3Q91Y16 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
Pcdha3Q91Y16 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC27.34■■□□□ 1.97
Pcdha3Q91Y16 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC27.33■■□□□ 1.97
Pcdha3Q91Y16 Gm24804-201ENSMUST00000174982 85 ntBASIC27.32■■□□□ 1.96
Pcdha3Q91Y16 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC27.32■■□□□ 1.96
Pcdha3Q91Y16 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
Pcdha3Q91Y16 Mipep-204ENSMUST00000225043 1548 ntBASIC27.29■■□□□ 1.96
Pcdha3Q91Y16 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
Pcdha3Q91Y16 Gm6658-202ENSMUST00000209493 1885 ntBASIC27.27■■□□□ 1.96
Pcdha3Q91Y16 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
Pcdha3Q91Y16 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
Pcdha3Q91Y16 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.94
Pcdha3Q91Y16 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC27.2■■□□□ 1.94
Pcdha3Q91Y16 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.94
Pcdha3Q91Y16 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC27.17■■□□□ 1.94
Pcdha3Q91Y16 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC27.16■■□□□ 1.94
Pcdha3Q91Y16 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC27.15■■□□□ 1.94
Pcdha3Q91Y16 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC27.14■■□□□ 1.94
Pcdha3Q91Y16 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC27.13■■□□□ 1.93
Pcdha3Q91Y16 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC27.13■■□□□ 1.93
Pcdha3Q91Y16 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
Pcdha3Q91Y16 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
Pcdha3Q91Y16 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC27.1■■□□□ 1.93
Pcdha3Q91Y16 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
Pcdha3Q91Y16 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC27.07■■□□□ 1.92
Pcdha3Q91Y16 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC27.07■■□□□ 1.92
Pcdha3Q91Y16 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC27.07■■□□□ 1.92
Pcdha3Q91Y16 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC27.05■■□□□ 1.92
Pcdha3Q91Y16 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC27.04■■□□□ 1.92
Pcdha3Q91Y16 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC27.01■■□□□ 1.91
Pcdha3Q91Y16 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC27.01■■□□□ 1.91
Pcdha3Q91Y16 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC27■■□□□ 1.91
Pcdha3Q91Y16 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC26.99■■□□□ 1.91
Pcdha3Q91Y16 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC26.98■■□□□ 1.91
Pcdha3Q91Y16 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC26.98■■□□□ 1.91
Pcdha3Q91Y16 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC26.97■■□□□ 1.91
Pcdha3Q91Y16 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC26.96■■□□□ 1.91
Pcdha3Q91Y16 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC26.96■■□□□ 1.91
Pcdha3Q91Y16 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC26.95■■□□□ 1.91
Pcdha3Q91Y16 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC26.95■■□□□ 1.9
Pcdha3Q91Y16 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC26.94■■□□□ 1.9
Pcdha3Q91Y16 AC153504.1-201ENSMUST00000218379 2290 ntBASIC26.94■■□□□ 1.9
Pcdha3Q91Y16 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC26.94■■□□□ 1.9
Pcdha3Q91Y16 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
Pcdha3Q91Y16 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC26.93■■□□□ 1.9
Pcdha3Q91Y16 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC26.9■■□□□ 1.9
Pcdha3Q91Y16 Peli2-204ENSMUST00000226513 1320 ntBASIC26.9■■□□□ 1.9
Pcdha3Q91Y16 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
Pcdha3Q91Y16 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC26.9■■□□□ 1.9
Pcdha3Q91Y16 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC26.89■■□□□ 1.9
Pcdha3Q91Y16 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC26.89■■□□□ 1.9
Pcdha3Q91Y16 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC26.88■■□□□ 1.89
Pcdha3Q91Y16 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
Pcdha3Q91Y16 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC26.86■■□□□ 1.89
Pcdha3Q91Y16 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC26.86■■□□□ 1.89
Pcdha3Q91Y16 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC26.85■■□□□ 1.89
Pcdha3Q91Y16 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC26.84■■□□□ 1.89
Pcdha3Q91Y16 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
Pcdha3Q91Y16 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC26.83■■□□□ 1.89
Pcdha3Q91Y16 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
Pcdha3Q91Y16 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
Pcdha3Q91Y16 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
Pcdha3Q91Y16 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
Pcdha3Q91Y16 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
Pcdha3Q91Y16 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC26.79■■□□□ 1.88
Pcdha3Q91Y16 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
Pcdha3Q91Y16 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC26.78■■□□□ 1.88
Pcdha3Q91Y16 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC26.78■■□□□ 1.88
Pcdha3Q91Y16 Gm16148-201ENSMUST00000119653 893 ntBASIC26.77■■□□□ 1.88
Pcdha3Q91Y16 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC26.75■■□□□ 1.87
Pcdha3Q91Y16 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
Pcdha3Q91Y16 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC26.74■■□□□ 1.87
Pcdha3Q91Y16 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC26.72■■□□□ 1.87
Pcdha3Q91Y16 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC26.72■■□□□ 1.87
Pcdha3Q91Y16 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC26.71■■□□□ 1.87
Pcdha3Q91Y16 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
Pcdha3Q91Y16 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.86
Pcdha3Q91Y16 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC26.69■■□□□ 1.86
Pcdha3Q91Y16 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
Pcdha3Q91Y16 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC26.69■■□□□ 1.86
Pcdha3Q91Y16 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC26.67■■□□□ 1.86
Pcdha3Q91Y16 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
Pcdha3Q91Y16 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC26.64■■□□□ 1.86
Pcdha3Q91Y16 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.86
Pcdha3Q91Y16 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
Pcdha3Q91Y16 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
Pcdha3Q91Y16 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
Pcdha3Q91Y16 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC26.6■■□□□ 1.85
Pcdha3Q91Y16 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC26.6■■□□□ 1.85
Pcdha3Q91Y16 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
Pcdha3Q91Y16 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC26.6■■□□□ 1.85
Pcdha3Q91Y16 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
Pcdha3Q91Y16 Zfp131-205ENSMUST00000223812 663 ntBASIC26.57■■□□□ 1.84
Pcdha3Q91Y16 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC26.56■■□□□ 1.84
Pcdha3Q91Y16 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
Pcdha3Q91Y16 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
Retrieved 100 of 76,532 protein–RNA pairs in 90.3 ms