Protein–RNA interactions for Protein: Q91XZ4

Pcdhb6, Protocadherin beta-6, mousemouse

Predictions only

Length 772 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb6Q91XZ4 Gm6658-202ENSMUST00000209493 1885 ntBASIC27.17■■□□□ 1.94
Pcdhb6Q91XZ4 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
Pcdhb6Q91XZ4 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC27.16■■□□□ 1.94
Pcdhb6Q91XZ4 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC27.15■■□□□ 1.94
Pcdhb6Q91XZ4 Gm8109-201ENSMUST00000194076 746 ntBASIC27.15■■□□□ 1.94
Pcdhb6Q91XZ4 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.93
Pcdhb6Q91XZ4 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC27.11■■□□□ 1.93
Pcdhb6Q91XZ4 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC27.11■■□□□ 1.93
Pcdhb6Q91XZ4 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC27.11■■□□□ 1.93
Pcdhb6Q91XZ4 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC27.08■■□□□ 1.93
Pcdhb6Q91XZ4 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC27.06■■□□□ 1.92
Pcdhb6Q91XZ4 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC27.05■■□□□ 1.92
Pcdhb6Q91XZ4 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC27.04■■□□□ 1.92
Pcdhb6Q91XZ4 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC27.03■■□□□ 1.92
Pcdhb6Q91XZ4 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC27.01■■□□□ 1.92
Pcdhb6Q91XZ4 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC27.01■■□□□ 1.91
Pcdhb6Q91XZ4 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC27■■□□□ 1.91
Pcdhb6Q91XZ4 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC26.98■■□□□ 1.91
Pcdhb6Q91XZ4 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC26.98■■□□□ 1.91
Pcdhb6Q91XZ4 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC26.96■■□□□ 1.91
Pcdhb6Q91XZ4 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC26.93■■□□□ 1.9
Pcdhb6Q91XZ4 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
Pcdhb6Q91XZ4 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC26.91■■□□□ 1.9
Pcdhb6Q91XZ4 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC26.9■■□□□ 1.9
Pcdhb6Q91XZ4 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.9
Pcdhb6Q91XZ4 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC26.86■■□□□ 1.89
Pcdhb6Q91XZ4 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
Pcdhb6Q91XZ4 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
Pcdhb6Q91XZ4 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
Pcdhb6Q91XZ4 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC26.82■■□□□ 1.88
Pcdhb6Q91XZ4 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
Pcdhb6Q91XZ4 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
Pcdhb6Q91XZ4 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC26.78■■□□□ 1.88
Pcdhb6Q91XZ4 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC26.77■■□□□ 1.88
Pcdhb6Q91XZ4 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC26.77■■□□□ 1.88
Pcdhb6Q91XZ4 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
Pcdhb6Q91XZ4 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC26.75■■□□□ 1.87
Pcdhb6Q91XZ4 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC26.75■■□□□ 1.87
Pcdhb6Q91XZ4 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
Pcdhb6Q91XZ4 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
Pcdhb6Q91XZ4 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
Pcdhb6Q91XZ4 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC26.73■■□□□ 1.87
Pcdhb6Q91XZ4 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
Pcdhb6Q91XZ4 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.87
Pcdhb6Q91XZ4 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
Pcdhb6Q91XZ4 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC26.68■■□□□ 1.86
Pcdhb6Q91XZ4 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC26.68■■□□□ 1.86
Pcdhb6Q91XZ4 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC26.67■■□□□ 1.86
Pcdhb6Q91XZ4 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC26.67■■□□□ 1.86
Pcdhb6Q91XZ4 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
Pcdhb6Q91XZ4 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC26.66■■□□□ 1.86
Pcdhb6Q91XZ4 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
Pcdhb6Q91XZ4 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC26.65■■□□□ 1.86
Pcdhb6Q91XZ4 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC26.64■■□□□ 1.86
Pcdhb6Q91XZ4 Peli2-204ENSMUST00000226513 1320 ntBASIC26.63■■□□□ 1.85
Pcdhb6Q91XZ4 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC26.62■■□□□ 1.85
Pcdhb6Q91XZ4 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC26.61■■□□□ 1.85
Pcdhb6Q91XZ4 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC26.61■■□□□ 1.85
Pcdhb6Q91XZ4 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC26.6■■□□□ 1.85
Pcdhb6Q91XZ4 AC153504.1-201ENSMUST00000218379 2290 ntBASIC26.59■■□□□ 1.85
Pcdhb6Q91XZ4 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
Pcdhb6Q91XZ4 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
Pcdhb6Q91XZ4 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC26.57■■□□□ 1.84
Pcdhb6Q91XZ4 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC26.57■■□□□ 1.84
Pcdhb6Q91XZ4 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC26.56■■□□□ 1.84
Pcdhb6Q91XZ4 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC26.56■■□□□ 1.84
Pcdhb6Q91XZ4 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
Pcdhb6Q91XZ4 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC26.55■■□□□ 1.84
Pcdhb6Q91XZ4 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
Pcdhb6Q91XZ4 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC26.53■■□□□ 1.84
Pcdhb6Q91XZ4 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
Pcdhb6Q91XZ4 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC26.51■■□□□ 1.83
Pcdhb6Q91XZ4 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
Pcdhb6Q91XZ4 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
Pcdhb6Q91XZ4 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
Pcdhb6Q91XZ4 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC26.49■■□□□ 1.83
Pcdhb6Q91XZ4 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC26.48■■□□□ 1.83
Pcdhb6Q91XZ4 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC26.46■■□□□ 1.83
Pcdhb6Q91XZ4 Gm24804-201ENSMUST00000174982 85 ntBASIC26.46■■□□□ 1.83
Pcdhb6Q91XZ4 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
Pcdhb6Q91XZ4 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC26.45■■□□□ 1.83
Pcdhb6Q91XZ4 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC26.45■■□□□ 1.82
Pcdhb6Q91XZ4 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
Pcdhb6Q91XZ4 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC26.43■■□□□ 1.82
Pcdhb6Q91XZ4 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC26.41■■□□□ 1.82
Pcdhb6Q91XZ4 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC26.41■■□□□ 1.82
Pcdhb6Q91XZ4 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC26.39■■□□□ 1.82
Pcdhb6Q91XZ4 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC26.39■■□□□ 1.82
Pcdhb6Q91XZ4 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC26.39■■□□□ 1.82
Pcdhb6Q91XZ4 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC26.38■■□□□ 1.81
Pcdhb6Q91XZ4 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
Pcdhb6Q91XZ4 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
Pcdhb6Q91XZ4 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC26.36■■□□□ 1.81
Pcdhb6Q91XZ4 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC26.36■■□□□ 1.81
Pcdhb6Q91XZ4 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
Pcdhb6Q91XZ4 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC26.35■■□□□ 1.81
Pcdhb6Q91XZ4 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
Pcdhb6Q91XZ4 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
Pcdhb6Q91XZ4 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
Pcdhb6Q91XZ4 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC26.33■■□□□ 1.81
Retrieved 100 of 76,532 protein–RNA pairs in 22.8 ms