Protein–RNA interactions for Protein: Q91XX6

Pcdhgb4, Protocadherin gamma B4, mousemouse

Predictions only

Length 912 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgb4Q91XX6 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC27.7■■■□□ 2.03
Pcdhgb4Q91XX6 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC27.7■■■□□ 2.02
Pcdhgb4Q91XX6 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC27.7■■■□□ 2.02
Pcdhgb4Q91XX6 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC27.68■■■□□ 2.02
Pcdhgb4Q91XX6 Gm27322-201ENSMUST00000184007 104 ntBASIC27.67■■■□□ 2.02
Pcdhgb4Q91XX6 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC27.67■■■□□ 2.02
Pcdhgb4Q91XX6 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC27.66■■■□□ 2.02
Pcdhgb4Q91XX6 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC27.65■■■□□ 2.02
Pcdhgb4Q91XX6 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC27.65■■■□□ 2.02
Pcdhgb4Q91XX6 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC27.64■■■□□ 2.02
Pcdhgb4Q91XX6 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC27.62■■■□□ 2.01
Pcdhgb4Q91XX6 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC27.57■■■□□ 2
Pcdhgb4Q91XX6 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC27.55■■■□□ 2
Pcdhgb4Q91XX6 AC153504.1-201ENSMUST00000218379 2290 ntBASIC27.55■■■□□ 2
Pcdhgb4Q91XX6 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC27.54■■■□□ 2
Pcdhgb4Q91XX6 AC166822.3-201ENSMUST00000227394 661 ntBASIC27.54■■■□□ 2
Pcdhgb4Q91XX6 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC27.54■■■□□ 2
Pcdhgb4Q91XX6 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC27.53■■■□□ 2
Pcdhgb4Q91XX6 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC27.53■■■□□ 2
Pcdhgb4Q91XX6 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC27.52■■■□□ 2
Pcdhgb4Q91XX6 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC27.52■■■□□ 2
Pcdhgb4Q91XX6 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC27.49■■□□□ 1.99
Pcdhgb4Q91XX6 Gm8109-201ENSMUST00000194076 746 ntBASIC27.48■■□□□ 1.99
Pcdhgb4Q91XX6 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC27.48■■□□□ 1.99
Pcdhgb4Q91XX6 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC27.48■■□□□ 1.99
Pcdhgb4Q91XX6 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC27.47■■□□□ 1.99
Pcdhgb4Q91XX6 Gm26115-201ENSMUST00000175605 87 ntBASIC27.46■■□□□ 1.99
Pcdhgb4Q91XX6 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC27.45■■□□□ 1.99
Pcdhgb4Q91XX6 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC27.44■■□□□ 1.98
Pcdhgb4Q91XX6 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC27.43■■□□□ 1.98
Pcdhgb4Q91XX6 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC27.43■■□□□ 1.98
Pcdhgb4Q91XX6 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC27.41■■□□□ 1.98
Pcdhgb4Q91XX6 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC27.41■■□□□ 1.98
Pcdhgb4Q91XX6 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.98
Pcdhgb4Q91XX6 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC27.39■■□□□ 1.98
Pcdhgb4Q91XX6 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC27.38■■□□□ 1.97
Pcdhgb4Q91XX6 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
Pcdhgb4Q91XX6 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
Pcdhgb4Q91XX6 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
Pcdhgb4Q91XX6 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC27.36■■□□□ 1.97
Pcdhgb4Q91XX6 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC27.35■■□□□ 1.97
Pcdhgb4Q91XX6 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC27.34■■□□□ 1.97
Pcdhgb4Q91XX6 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC27.33■■□□□ 1.97
Pcdhgb4Q91XX6 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC27.32■■□□□ 1.96
Pcdhgb4Q91XX6 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
Pcdhgb4Q91XX6 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
Pcdhgb4Q91XX6 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC27.31■■□□□ 1.96
Pcdhgb4Q91XX6 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC27.3■■□□□ 1.96
Pcdhgb4Q91XX6 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
Pcdhgb4Q91XX6 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC27.3■■□□□ 1.96
Pcdhgb4Q91XX6 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
Pcdhgb4Q91XX6 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC27.26■■□□□ 1.95
Pcdhgb4Q91XX6 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
Pcdhgb4Q91XX6 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
Pcdhgb4Q91XX6 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC27.18■■□□□ 1.94
Pcdhgb4Q91XX6 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC27.18■■□□□ 1.94
Pcdhgb4Q91XX6 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
Pcdhgb4Q91XX6 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
Pcdhgb4Q91XX6 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC27.17■■□□□ 1.94
Pcdhgb4Q91XX6 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
Pcdhgb4Q91XX6 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
Pcdhgb4Q91XX6 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC27.16■■□□□ 1.94
Pcdhgb4Q91XX6 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.94
Pcdhgb4Q91XX6 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC27.14■■□□□ 1.93
Pcdhgb4Q91XX6 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
Pcdhgb4Q91XX6 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC27.12■■□□□ 1.93
Pcdhgb4Q91XX6 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
Pcdhgb4Q91XX6 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
Pcdhgb4Q91XX6 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC27.11■■□□□ 1.93
Pcdhgb4Q91XX6 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
Pcdhgb4Q91XX6 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
Pcdhgb4Q91XX6 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
Pcdhgb4Q91XX6 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC27.08■■□□□ 1.93
Pcdhgb4Q91XX6 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC27.08■■□□□ 1.93
Pcdhgb4Q91XX6 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC27.07■■□□□ 1.92
Pcdhgb4Q91XX6 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
Pcdhgb4Q91XX6 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC27.03■■□□□ 1.92
Pcdhgb4Q91XX6 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC27.02■■□□□ 1.92
Pcdhgb4Q91XX6 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC27■■□□□ 1.91
Pcdhgb4Q91XX6 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC27■■□□□ 1.91
Pcdhgb4Q91XX6 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC27■■□□□ 1.91
Pcdhgb4Q91XX6 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC27■■□□□ 1.91
Pcdhgb4Q91XX6 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC27■■□□□ 1.91
Pcdhgb4Q91XX6 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC26.98■■□□□ 1.91
Pcdhgb4Q91XX6 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC26.97■■□□□ 1.91
Pcdhgb4Q91XX6 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC26.96■■□□□ 1.91
Pcdhgb4Q91XX6 Peli2-204ENSMUST00000226513 1320 ntBASIC26.96■■□□□ 1.91
Pcdhgb4Q91XX6 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC26.95■■□□□ 1.9
Pcdhgb4Q91XX6 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC26.94■■□□□ 1.9
Pcdhgb4Q91XX6 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC26.94■■□□□ 1.9
Pcdhgb4Q91XX6 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
Pcdhgb4Q91XX6 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC26.94■■□□□ 1.9
Pcdhgb4Q91XX6 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC26.93■■□□□ 1.9
Pcdhgb4Q91XX6 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC26.91■■□□□ 1.9
Pcdhgb4Q91XX6 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC26.91■■□□□ 1.9
Pcdhgb4Q91XX6 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC26.91■■□□□ 1.9
Pcdhgb4Q91XX6 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC26.91■■□□□ 1.9
Pcdhgb4Q91XX6 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
Pcdhgb4Q91XX6 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC26.87■■□□□ 1.89
Pcdhgb4Q91XX6 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC26.87■■□□□ 1.89
Retrieved 100 of 76,532 protein–RNA pairs in 61.2 ms