Protein–RNA interactions for Protein: Q91VF6

Col26a1, Collagen alpha-1(XXVI) chain, mousemouse

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col26a1Q91VF6 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC30.3■■■□□ 2.44
Col26a1Q91VF6 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC30.28■■■□□ 2.44
Col26a1Q91VF6 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC30.26■■■□□ 2.43
Col26a1Q91VF6 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC30.23■■■□□ 2.43
Col26a1Q91VF6 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC30.23■■■□□ 2.43
Col26a1Q91VF6 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC30.22■■■□□ 2.43
Col26a1Q91VF6 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC30.22■■■□□ 2.43
Col26a1Q91VF6 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC30.2■■■□□ 2.43
Col26a1Q91VF6 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC30.18■■■□□ 2.42
Col26a1Q91VF6 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC30.16■■■□□ 2.42
Col26a1Q91VF6 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC30.15■■■□□ 2.42
Col26a1Q91VF6 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC30.15■■■□□ 2.42
Col26a1Q91VF6 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC30.14■■■□□ 2.42
Col26a1Q91VF6 Gm6821-201ENSMUST00000107540 542 ntBASIC30.12■■■□□ 2.41
Col26a1Q91VF6 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC30.09■■■□□ 2.41
Col26a1Q91VF6 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC30.08■■■□□ 2.41
Col26a1Q91VF6 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC30.07■■■□□ 2.4
Col26a1Q91VF6 Psd-208ENSMUST00000224556 2034 ntBASIC30.06■■■□□ 2.4
Col26a1Q91VF6 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC30.05■■■□□ 2.4
Col26a1Q91VF6 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC30.04■■■□□ 2.4
Col26a1Q91VF6 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC30.03■■■□□ 2.4
Col26a1Q91VF6 Mir6538-201ENSMUST00000183713 110 ntBASIC30.02■■■□□ 2.4
Col26a1Q91VF6 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC29.98■■■□□ 2.39
Col26a1Q91VF6 Peli2-204ENSMUST00000226513 1320 ntBASIC29.96■■■□□ 2.39
Col26a1Q91VF6 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC29.96■■■□□ 2.39
Col26a1Q91VF6 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC29.96■■■□□ 2.39
Col26a1Q91VF6 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC29.94■■■□□ 2.38
Col26a1Q91VF6 Cap2-205ENSMUST00000225824 1634 ntBASIC29.93■■■□□ 2.38
Col26a1Q91VF6 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC29.92■■■□□ 2.38
Col26a1Q91VF6 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC29.91■■■□□ 2.38
Col26a1Q91VF6 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC29.89■■■□□ 2.38
Col26a1Q91VF6 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC29.86■■■□□ 2.37
Col26a1Q91VF6 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC29.82■■■□□ 2.36
Col26a1Q91VF6 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC29.82■■■□□ 2.36
Col26a1Q91VF6 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC29.81■■■□□ 2.36
Col26a1Q91VF6 Gm24970-201ENSMUST00000175582 82 ntBASIC29.79■■■□□ 2.36
Col26a1Q91VF6 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC29.79■■■□□ 2.36
Col26a1Q91VF6 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC29.77■■■□□ 2.36
Col26a1Q91VF6 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC29.74■■■□□ 2.35
Col26a1Q91VF6 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC29.73■■■□□ 2.35
Col26a1Q91VF6 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC29.73■■■□□ 2.35
Col26a1Q91VF6 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC29.72■■■□□ 2.35
Col26a1Q91VF6 AL845457.1-201ENSMUST00000197244 68 ntBASIC29.71■■■□□ 2.35
Col26a1Q91VF6 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC29.7■■■□□ 2.35
Col26a1Q91VF6 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC29.69■■■□□ 2.34
Col26a1Q91VF6 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC29.68■■■□□ 2.34
Col26a1Q91VF6 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC29.68■■■□□ 2.34
Col26a1Q91VF6 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC29.68■■■□□ 2.34
Col26a1Q91VF6 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC29.68■■■□□ 2.34
Col26a1Q91VF6 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC29.67■■■□□ 2.34
Col26a1Q91VF6 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC29.66■■■□□ 2.34
Col26a1Q91VF6 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC29.62■■■□□ 2.33
Col26a1Q91VF6 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC29.62■■■□□ 2.33
Col26a1Q91VF6 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC29.58■■■□□ 2.33
Col26a1Q91VF6 Gm11175-201ENSMUST00000116172 543 ntBASIC29.57■■■□□ 2.32
Col26a1Q91VF6 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC29.56■■■□□ 2.32
Col26a1Q91VF6 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC29.56■■■□□ 2.32
Col26a1Q91VF6 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC29.52■■■□□ 2.32
Col26a1Q91VF6 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC29.51■■■□□ 2.31
Col26a1Q91VF6 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC29.5■■■□□ 2.31
Col26a1Q91VF6 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC29.49■■■□□ 2.31
Col26a1Q91VF6 Gm7432-201ENSMUST00000210343 879 ntBASIC29.45■■■□□ 2.31
Col26a1Q91VF6 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC29.43■■■□□ 2.3
Col26a1Q91VF6 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC29.41■■■□□ 2.3
Col26a1Q91VF6 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC29.41■■■□□ 2.3
Col26a1Q91VF6 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC29.41■■■□□ 2.3
Col26a1Q91VF6 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC29.41■■■□□ 2.3
Col26a1Q91VF6 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC29.41■■■□□ 2.3
Col26a1Q91VF6 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC29.37■■■□□ 2.29
Col26a1Q91VF6 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC29.37■■■□□ 2.29
Col26a1Q91VF6 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC29.35■■■□□ 2.29
Col26a1Q91VF6 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC29.33■■■□□ 2.29
Col26a1Q91VF6 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC29.32■■■□□ 2.28
Col26a1Q91VF6 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC29.3■■■□□ 2.28
Col26a1Q91VF6 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC29.3■■■□□ 2.28
Col26a1Q91VF6 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC29.27■■■□□ 2.28
Col26a1Q91VF6 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC29.26■■■□□ 2.27
Col26a1Q91VF6 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC29.25■■■□□ 2.27
Col26a1Q91VF6 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC29.23■■■□□ 2.27
Col26a1Q91VF6 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC29.21■■■□□ 2.27
Col26a1Q91VF6 Gm22567-201ENSMUST00000175542 342 ntBASIC29.2■■■□□ 2.26
Col26a1Q91VF6 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC29.2■■■□□ 2.26
Col26a1Q91VF6 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC29.17■■■□□ 2.26
Col26a1Q91VF6 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC29.16■■■□□ 2.26
Col26a1Q91VF6 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC29.16■■■□□ 2.26
Col26a1Q91VF6 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC29.15■■■□□ 2.26
Col26a1Q91VF6 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC29.15■■■□□ 2.26
Col26a1Q91VF6 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC29.15■■■□□ 2.26
Col26a1Q91VF6 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC29.15■■■□□ 2.26
Col26a1Q91VF6 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC29.14■■■□□ 2.26
Col26a1Q91VF6 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC29.14■■■□□ 2.26
Col26a1Q91VF6 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC29.14■■■□□ 2.26
Col26a1Q91VF6 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC29.11■■■□□ 2.25
Col26a1Q91VF6 Gm42809-201ENSMUST00000198429 1138 ntBASIC29.11■■■□□ 2.25
Col26a1Q91VF6 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC29.1■■■□□ 2.25
Col26a1Q91VF6 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC29.09■■■□□ 2.25
Col26a1Q91VF6 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC29.08■■■□□ 2.25
Col26a1Q91VF6 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC29.08■■■□□ 2.25
Col26a1Q91VF6 Gm11599-201ENSMUST00000118720 878 ntBASIC29.06■■■□□ 2.24
Col26a1Q91VF6 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC29.06■■■□□ 2.24
Retrieved 100 of 76,532 protein–RNA pairs in 15.1 ms