Protein–RNA interactions for Protein: Q91VA1

Slc44a4, Choline transporter-like protein 4, mousemouse

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc44a4Q91VA1 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC31.98■■■□□ 2.71
Slc44a4Q91VA1 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC31.97■■■□□ 2.71
Slc44a4Q91VA1 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC31.97■■■□□ 2.71
Slc44a4Q91VA1 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC31.93■■■□□ 2.7
Slc44a4Q91VA1 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC31.93■■■□□ 2.7
Slc44a4Q91VA1 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC31.87■■■□□ 2.69
Slc44a4Q91VA1 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC31.87■■■□□ 2.69
Slc44a4Q91VA1 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC31.86■■■□□ 2.69
Slc44a4Q91VA1 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC31.85■■■□□ 2.69
Slc44a4Q91VA1 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC31.83■■■□□ 2.69
Slc44a4Q91VA1 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC31.83■■■□□ 2.69
Slc44a4Q91VA1 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC31.83■■■□□ 2.69
Slc44a4Q91VA1 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC31.82■■■□□ 2.68
Slc44a4Q91VA1 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC31.82■■■□□ 2.68
Slc44a4Q91VA1 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC31.79■■■□□ 2.68
Slc44a4Q91VA1 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC31.79■■■□□ 2.68
Slc44a4Q91VA1 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC31.79■■■□□ 2.68
Slc44a4Q91VA1 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC31.78■■■□□ 2.68
Slc44a4Q91VA1 Tdp2-203ENSMUST00000223804 1136 ntBASIC31.76■■■□□ 2.67
Slc44a4Q91VA1 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC31.73■■■□□ 2.67
Slc44a4Q91VA1 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC31.73■■■□□ 2.67
Slc44a4Q91VA1 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC31.72■■■□□ 2.67
Slc44a4Q91VA1 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC31.72■■■□□ 2.67
Slc44a4Q91VA1 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC31.7■■■□□ 2.67
Slc44a4Q91VA1 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC31.7■■■□□ 2.66
Slc44a4Q91VA1 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC31.7■■■□□ 2.66
Slc44a4Q91VA1 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC31.69■■■□□ 2.66
Slc44a4Q91VA1 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC31.69■■■□□ 2.66
Slc44a4Q91VA1 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC31.69■■■□□ 2.66
Slc44a4Q91VA1 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC31.68■■■□□ 2.66
Slc44a4Q91VA1 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC31.66■■■□□ 2.66
Slc44a4Q91VA1 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC31.65■■■□□ 2.66
Slc44a4Q91VA1 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC31.65■■■□□ 2.66
Slc44a4Q91VA1 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC31.58■■■□□ 2.65
Slc44a4Q91VA1 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC31.58■■■□□ 2.65
Slc44a4Q91VA1 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC31.52■■■□□ 2.64
Slc44a4Q91VA1 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC31.5■■■□□ 2.63
Slc44a4Q91VA1 Gm45855-201ENSMUST00000212546 880 ntBASIC31.5■■■□□ 2.63
Slc44a4Q91VA1 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC31.48■■■□□ 2.63
Slc44a4Q91VA1 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC31.46■■■□□ 2.63
Slc44a4Q91VA1 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC31.45■■■□□ 2.63
Slc44a4Q91VA1 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC31.44■■■□□ 2.62
Slc44a4Q91VA1 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC31.43■■■□□ 2.62
Slc44a4Q91VA1 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC31.42■■■□□ 2.62
Slc44a4Q91VA1 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC31.41■■■□□ 2.62
Slc44a4Q91VA1 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC31.41■■■□□ 2.62
Slc44a4Q91VA1 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC31.4■■■□□ 2.62
Slc44a4Q91VA1 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC31.39■■■□□ 2.62
Slc44a4Q91VA1 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC31.38■■■□□ 2.61
Slc44a4Q91VA1 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC31.37■■■□□ 2.61
Slc44a4Q91VA1 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC31.36■■■□□ 2.61
Slc44a4Q91VA1 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC31.35■■■□□ 2.61
Slc44a4Q91VA1 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC31.34■■■□□ 2.61
Slc44a4Q91VA1 Gm9397-201ENSMUST00000200125 605 ntBASIC31.34■■■□□ 2.61
Slc44a4Q91VA1 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC31.33■■■□□ 2.61
Slc44a4Q91VA1 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC31.32■■■□□ 2.6
Slc44a4Q91VA1 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC31.3■■■□□ 2.6
Slc44a4Q91VA1 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC31.28■■■□□ 2.6
Slc44a4Q91VA1 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC31.28■■■□□ 2.6
Slc44a4Q91VA1 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC31.27■■■□□ 2.6
Slc44a4Q91VA1 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC31.26■■■□□ 2.59
Slc44a4Q91VA1 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC31.25■■■□□ 2.59
Slc44a4Q91VA1 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC31.24■■■□□ 2.59
Slc44a4Q91VA1 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC31.24■■■□□ 2.59
Slc44a4Q91VA1 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC31.22■■■□□ 2.59
Slc44a4Q91VA1 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC31.22■■■□□ 2.59
Slc44a4Q91VA1 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
Slc44a4Q91VA1 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC31.19■■■□□ 2.58
Slc44a4Q91VA1 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC31.19■■■□□ 2.58
Slc44a4Q91VA1 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC31.19■■■□□ 2.58
Slc44a4Q91VA1 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC31.17■■■□□ 2.58
Slc44a4Q91VA1 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC31.17■■■□□ 2.58
Slc44a4Q91VA1 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC31.16■■■□□ 2.58
Slc44a4Q91VA1 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC31.15■■■□□ 2.58
Slc44a4Q91VA1 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC31.15■■■□□ 2.58
Slc44a4Q91VA1 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC31.14■■■□□ 2.57
Slc44a4Q91VA1 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC31.13■■■□□ 2.57
Slc44a4Q91VA1 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC31.13■■■□□ 2.57
Slc44a4Q91VA1 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC31.12■■■□□ 2.57
Slc44a4Q91VA1 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC31.12■■■□□ 2.57
Slc44a4Q91VA1 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC31.12■■■□□ 2.57
Slc44a4Q91VA1 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC31.1■■■□□ 2.57
Slc44a4Q91VA1 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC31.09■■■□□ 2.57
Slc44a4Q91VA1 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC31.09■■■□□ 2.57
Slc44a4Q91VA1 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC31.08■■■□□ 2.57
Slc44a4Q91VA1 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC31.08■■■□□ 2.57
Slc44a4Q91VA1 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC31.08■■■□□ 2.57
Slc44a4Q91VA1 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC31.07■■■□□ 2.56
Slc44a4Q91VA1 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC31.06■■■□□ 2.56
Slc44a4Q91VA1 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC31.04■■■□□ 2.56
Slc44a4Q91VA1 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC31.03■■■□□ 2.56
Slc44a4Q91VA1 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC31.03■■■□□ 2.56
Slc44a4Q91VA1 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC31.03■■■□□ 2.56
Slc44a4Q91VA1 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC31.03■■■□□ 2.56
Slc44a4Q91VA1 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC31.02■■■□□ 2.56
Slc44a4Q91VA1 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC31.01■■■□□ 2.56
Slc44a4Q91VA1 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC30.99■■■□□ 2.55
Slc44a4Q91VA1 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC30.97■■■□□ 2.55
Slc44a4Q91VA1 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC30.96■■■□□ 2.55
Slc44a4Q91VA1 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC30.96■■■□□ 2.55
Retrieved 100 of 76,532 protein–RNA pairs in 13 ms