Protein–RNA interactions for Protein: Q8VC56

Rnf8, E3 ubiquitin-protein ligase RNF8, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf8Q8VC56 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC24.78■■□□□ 1.56
Rnf8Q8VC56 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC24.77■■□□□ 1.56
Rnf8Q8VC56 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC24.76■■□□□ 1.55
Rnf8Q8VC56 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
Rnf8Q8VC56 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC24.75■■□□□ 1.55
Rnf8Q8VC56 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
Rnf8Q8VC56 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC24.75■■□□□ 1.55
Rnf8Q8VC56 Gm6658-202ENSMUST00000209493 1885 ntBASIC24.72■■□□□ 1.55
Rnf8Q8VC56 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
Rnf8Q8VC56 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.55
Rnf8Q8VC56 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC24.7■■□□□ 1.55
Rnf8Q8VC56 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC24.7■■□□□ 1.54
Rnf8Q8VC56 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
Rnf8Q8VC56 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
Rnf8Q8VC56 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC24.62■■□□□ 1.53
Rnf8Q8VC56 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
Rnf8Q8VC56 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
Rnf8Q8VC56 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC24.59■■□□□ 1.53
Rnf8Q8VC56 AC166822.3-201ENSMUST00000227394 661 ntBASIC24.59■■□□□ 1.53
Rnf8Q8VC56 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
Rnf8Q8VC56 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
Rnf8Q8VC56 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
Rnf8Q8VC56 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC24.56■■□□□ 1.52
Rnf8Q8VC56 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
Rnf8Q8VC56 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC24.54■■□□□ 1.52
Rnf8Q8VC56 Mipep-204ENSMUST00000225043 1548 ntBASIC24.53■■□□□ 1.52
Rnf8Q8VC56 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC24.51■■□□□ 1.51
Rnf8Q8VC56 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
Rnf8Q8VC56 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
Rnf8Q8VC56 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
Rnf8Q8VC56 Zxda-201ENSMUST00000117281 2621 ntBASIC24.47■■□□□ 1.51
Rnf8Q8VC56 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC24.46■■□□□ 1.51
Rnf8Q8VC56 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
Rnf8Q8VC56 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC24.45■■□□□ 1.5
Rnf8Q8VC56 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC24.44■■□□□ 1.5
Rnf8Q8VC56 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC24.44■■□□□ 1.5
Rnf8Q8VC56 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
Rnf8Q8VC56 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
Rnf8Q8VC56 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
Rnf8Q8VC56 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC24.39■■□□□ 1.49
Rnf8Q8VC56 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
Rnf8Q8VC56 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC24.38■■□□□ 1.49
Rnf8Q8VC56 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC24.37■■□□□ 1.49
Rnf8Q8VC56 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC24.37■■□□□ 1.49
Rnf8Q8VC56 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
Rnf8Q8VC56 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
Rnf8Q8VC56 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC24.34■■□□□ 1.49
Rnf8Q8VC56 Gm24804-201ENSMUST00000174982 85 ntBASIC24.34■■□□□ 1.49
Rnf8Q8VC56 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
Rnf8Q8VC56 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
Rnf8Q8VC56 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
Rnf8Q8VC56 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC24.32■■□□□ 1.48
Rnf8Q8VC56 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
Rnf8Q8VC56 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC24.31■■□□□ 1.48
Rnf8Q8VC56 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
Rnf8Q8VC56 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC24.31■■□□□ 1.48
Rnf8Q8VC56 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC24.3■■□□□ 1.48
Rnf8Q8VC56 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
Rnf8Q8VC56 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC24.3■■□□□ 1.48
Rnf8Q8VC56 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC24.3■■□□□ 1.48
Rnf8Q8VC56 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
Rnf8Q8VC56 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
Rnf8Q8VC56 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
Rnf8Q8VC56 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
Rnf8Q8VC56 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC24.23■■□□□ 1.47
Rnf8Q8VC56 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC24.22■■□□□ 1.47
Rnf8Q8VC56 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
Rnf8Q8VC56 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
Rnf8Q8VC56 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC24.21■■□□□ 1.47
Rnf8Q8VC56 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC24.2■■□□□ 1.47
Rnf8Q8VC56 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC24.2■■□□□ 1.46
Rnf8Q8VC56 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC24.2■■□□□ 1.46
Rnf8Q8VC56 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
Rnf8Q8VC56 Gm9905-201ENSMUST00000065740 1845 ntBASIC24.18■■□□□ 1.46
Rnf8Q8VC56 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
Rnf8Q8VC56 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
Rnf8Q8VC56 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC24.16■■□□□ 1.46
Rnf8Q8VC56 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
Rnf8Q8VC56 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.46
Rnf8Q8VC56 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.46
Rnf8Q8VC56 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC24.14■■□□□ 1.45
Rnf8Q8VC56 Gm6206-201ENSMUST00000133472 2199 ntBASIC24.13■■□□□ 1.45
Rnf8Q8VC56 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
Rnf8Q8VC56 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
Rnf8Q8VC56 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
Rnf8Q8VC56 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC24.1■■□□□ 1.45
Rnf8Q8VC56 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC24.09■■□□□ 1.45
Rnf8Q8VC56 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
Rnf8Q8VC56 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.44
Rnf8Q8VC56 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
Rnf8Q8VC56 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
Rnf8Q8VC56 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
Rnf8Q8VC56 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
Rnf8Q8VC56 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
Rnf8Q8VC56 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
Rnf8Q8VC56 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC24.05■■□□□ 1.44
Rnf8Q8VC56 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
Rnf8Q8VC56 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
Rnf8Q8VC56 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
Rnf8Q8VC56 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
Retrieved 100 of 76,532 protein–RNA pairs in 162.2 ms