Protein–RNA interactions for Protein: Q8R2B9

Vmn1r59, Vomeronasal type-1 receptor, mousemouse

Predictions only

Length 310 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vmn1r59Q8R2B9 AC153504.1-201ENSMUST00000218379 2290 ntBASIC22.83■■□□□ 1.25
Vmn1r59Q8R2B9 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC22.82■■□□□ 1.24
Vmn1r59Q8R2B9 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC22.82■■□□□ 1.24
Vmn1r59Q8R2B9 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC22.8■■□□□ 1.24
Vmn1r59Q8R2B9 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC22.8■■□□□ 1.24
Vmn1r59Q8R2B9 Gm24804-201ENSMUST00000174982 85 ntBASIC22.79■■□□□ 1.24
Vmn1r59Q8R2B9 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC22.79■■□□□ 1.24
Vmn1r59Q8R2B9 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
Vmn1r59Q8R2B9 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC22.78■■□□□ 1.24
Vmn1r59Q8R2B9 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
Vmn1r59Q8R2B9 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
Vmn1r59Q8R2B9 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
Vmn1r59Q8R2B9 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
Vmn1r59Q8R2B9 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
Vmn1r59Q8R2B9 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
Vmn1r59Q8R2B9 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC22.67■■□□□ 1.22
Vmn1r59Q8R2B9 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Vmn1r59Q8R2B9 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
Vmn1r59Q8R2B9 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Vmn1r59Q8R2B9 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC22.62■■□□□ 1.21
Vmn1r59Q8R2B9 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Vmn1r59Q8R2B9 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC22.58■■□□□ 1.21
Vmn1r59Q8R2B9 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC22.58■■□□□ 1.21
Vmn1r59Q8R2B9 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
Vmn1r59Q8R2B9 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Vmn1r59Q8R2B9 Mipep-204ENSMUST00000225043 1548 ntBASIC22.57■■□□□ 1.2
Vmn1r59Q8R2B9 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC22.57■■□□□ 1.2
Vmn1r59Q8R2B9 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC22.54■■□□□ 1.2
Vmn1r59Q8R2B9 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC22.54■■□□□ 1.2
Vmn1r59Q8R2B9 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
Vmn1r59Q8R2B9 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC22.52■■□□□ 1.2
Vmn1r59Q8R2B9 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
Vmn1r59Q8R2B9 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Vmn1r59Q8R2B9 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
Vmn1r59Q8R2B9 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Vmn1r59Q8R2B9 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.19
Vmn1r59Q8R2B9 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Vmn1r59Q8R2B9 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
Vmn1r59Q8R2B9 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Vmn1r59Q8R2B9 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC22.47■■□□□ 1.19
Vmn1r59Q8R2B9 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Vmn1r59Q8R2B9 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Vmn1r59Q8R2B9 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
Vmn1r59Q8R2B9 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
Vmn1r59Q8R2B9 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC22.4■■□□□ 1.18
Vmn1r59Q8R2B9 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
Vmn1r59Q8R2B9 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
Vmn1r59Q8R2B9 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC22.38■■□□□ 1.17
Vmn1r59Q8R2B9 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Vmn1r59Q8R2B9 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
Vmn1r59Q8R2B9 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC22.37■■□□□ 1.17
Vmn1r59Q8R2B9 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC22.34■■□□□ 1.17
Vmn1r59Q8R2B9 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Vmn1r59Q8R2B9 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Vmn1r59Q8R2B9 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Vmn1r59Q8R2B9 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC22.33■■□□□ 1.16
Vmn1r59Q8R2B9 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC22.32■■□□□ 1.16
Vmn1r59Q8R2B9 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Vmn1r59Q8R2B9 Gm16148-201ENSMUST00000119653 893 ntBASIC22.31■■□□□ 1.16
Vmn1r59Q8R2B9 Peli2-204ENSMUST00000226513 1320 ntBASIC22.31■■□□□ 1.16
Vmn1r59Q8R2B9 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC22.3■■□□□ 1.16
Vmn1r59Q8R2B9 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC22.3■■□□□ 1.16
Vmn1r59Q8R2B9 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC22.29■■□□□ 1.16
Vmn1r59Q8R2B9 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC22.29■■□□□ 1.16
Vmn1r59Q8R2B9 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Vmn1r59Q8R2B9 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC22.28■■□□□ 1.16
Vmn1r59Q8R2B9 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Vmn1r59Q8R2B9 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC22.25■■□□□ 1.15
Vmn1r59Q8R2B9 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
Vmn1r59Q8R2B9 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC22.23■■□□□ 1.15
Vmn1r59Q8R2B9 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Vmn1r59Q8R2B9 Zfp131-205ENSMUST00000223812 663 ntBASIC22.2■■□□□ 1.14
Vmn1r59Q8R2B9 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Vmn1r59Q8R2B9 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
Vmn1r59Q8R2B9 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Vmn1r59Q8R2B9 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Vmn1r59Q8R2B9 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Vmn1r59Q8R2B9 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Vmn1r59Q8R2B9 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
Vmn1r59Q8R2B9 Gm2415-204ENSMUST00000190235 2004 ntBASIC22.14■■□□□ 1.14
Vmn1r59Q8R2B9 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
Vmn1r59Q8R2B9 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC22.14■■□□□ 1.13
Vmn1r59Q8R2B9 Gm9905-201ENSMUST00000065740 1845 ntBASIC22.14■■□□□ 1.13
Vmn1r59Q8R2B9 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Vmn1r59Q8R2B9 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
Vmn1r59Q8R2B9 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
Vmn1r59Q8R2B9 Gm6206-201ENSMUST00000133472 2199 ntBASIC22.1■■□□□ 1.13
Vmn1r59Q8R2B9 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC22.1■■□□□ 1.13
Vmn1r59Q8R2B9 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
Vmn1r59Q8R2B9 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Vmn1r59Q8R2B9 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
Vmn1r59Q8R2B9 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
Vmn1r59Q8R2B9 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Vmn1r59Q8R2B9 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Vmn1r59Q8R2B9 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
Vmn1r59Q8R2B9 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC22.04■■□□□ 1.12
Vmn1r59Q8R2B9 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Vmn1r59Q8R2B9 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
Vmn1r59Q8R2B9 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC22.03■■□□□ 1.12
Vmn1r59Q8R2B9 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Retrieved 100 of 76,532 protein–RNA pairs in 14.8 ms