Protein–RNA interactions for Protein: Q8R1J3

Zcchc9, Zinc finger CCHC domain-containing protein 9, mousemouse

Known RBP Predictions only

Length 271 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zcchc9Q8R1J3 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC26.2■■□□□ 1.78
Zcchc9Q8R1J3 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC26.2■■□□□ 1.78
Zcchc9Q8R1J3 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
Zcchc9Q8R1J3 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC26.17■■□□□ 1.78
Zcchc9Q8R1J3 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC26.14■■□□□ 1.77
Zcchc9Q8R1J3 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.77
Zcchc9Q8R1J3 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
Zcchc9Q8R1J3 Tdp2-203ENSMUST00000223804 1136 ntBASIC26.11■■□□□ 1.77
Zcchc9Q8R1J3 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC26.1■■□□□ 1.77
Zcchc9Q8R1J3 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC26.09■■□□□ 1.77
Zcchc9Q8R1J3 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
Zcchc9Q8R1J3 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC26.08■■□□□ 1.77
Zcchc9Q8R1J3 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC26.07■■□□□ 1.76
Zcchc9Q8R1J3 Mipep-204ENSMUST00000225043 1548 ntBASIC26.05■■□□□ 1.76
Zcchc9Q8R1J3 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC26.05■■□□□ 1.76
Zcchc9Q8R1J3 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC26.05■■□□□ 1.76
Zcchc9Q8R1J3 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
Zcchc9Q8R1J3 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC26.04■■□□□ 1.76
Zcchc9Q8R1J3 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC26.03■■□□□ 1.76
Zcchc9Q8R1J3 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC26.01■■□□□ 1.75
Zcchc9Q8R1J3 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC26.01■■□□□ 1.75
Zcchc9Q8R1J3 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC25.99■■□□□ 1.75
Zcchc9Q8R1J3 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
Zcchc9Q8R1J3 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC25.98■■□□□ 1.75
Zcchc9Q8R1J3 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
Zcchc9Q8R1J3 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
Zcchc9Q8R1J3 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC25.96■■□□□ 1.75
Zcchc9Q8R1J3 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC25.96■■□□□ 1.75
Zcchc9Q8R1J3 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC25.95■■□□□ 1.74
Zcchc9Q8R1J3 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
Zcchc9Q8R1J3 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC25.93■■□□□ 1.74
Zcchc9Q8R1J3 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC25.93■■□□□ 1.74
Zcchc9Q8R1J3 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
Zcchc9Q8R1J3 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC25.91■■□□□ 1.74
Zcchc9Q8R1J3 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC25.9■■□□□ 1.74
Zcchc9Q8R1J3 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC25.9■■□□□ 1.74
Zcchc9Q8R1J3 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC25.88■■□□□ 1.73
Zcchc9Q8R1J3 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC25.87■■□□□ 1.73
Zcchc9Q8R1J3 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC25.87■■□□□ 1.73
Zcchc9Q8R1J3 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
Zcchc9Q8R1J3 Gm45855-201ENSMUST00000212546 880 ntBASIC25.86■■□□□ 1.73
Zcchc9Q8R1J3 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC25.85■■□□□ 1.73
Zcchc9Q8R1J3 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC25.83■■□□□ 1.73
Zcchc9Q8R1J3 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
Zcchc9Q8R1J3 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC25.81■■□□□ 1.72
Zcchc9Q8R1J3 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC25.81■■□□□ 1.72
Zcchc9Q8R1J3 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC25.79■■□□□ 1.72
Zcchc9Q8R1J3 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
Zcchc9Q8R1J3 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC25.77■■□□□ 1.72
Zcchc9Q8R1J3 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC25.77■■□□□ 1.72
Zcchc9Q8R1J3 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
Zcchc9Q8R1J3 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
Zcchc9Q8R1J3 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC25.74■■□□□ 1.71
Zcchc9Q8R1J3 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC25.74■■□□□ 1.71
Zcchc9Q8R1J3 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC25.73■■□□□ 1.71
Zcchc9Q8R1J3 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC25.71■■□□□ 1.71
Zcchc9Q8R1J3 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC25.7■■□□□ 1.71
Zcchc9Q8R1J3 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC25.7■■□□□ 1.7
Zcchc9Q8R1J3 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
Zcchc9Q8R1J3 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC25.67■■□□□ 1.7
Zcchc9Q8R1J3 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
Zcchc9Q8R1J3 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
Zcchc9Q8R1J3 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC25.64■■□□□ 1.7
Zcchc9Q8R1J3 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.69
Zcchc9Q8R1J3 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC25.63■■□□□ 1.69
Zcchc9Q8R1J3 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
Zcchc9Q8R1J3 Gm9397-201ENSMUST00000200125 605 ntBASIC25.62■■□□□ 1.69
Zcchc9Q8R1J3 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC25.62■■□□□ 1.69
Zcchc9Q8R1J3 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
Zcchc9Q8R1J3 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC25.58■■□□□ 1.69
Zcchc9Q8R1J3 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC25.58■■□□□ 1.69
Zcchc9Q8R1J3 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC25.57■■□□□ 1.68
Zcchc9Q8R1J3 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
Zcchc9Q8R1J3 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
Zcchc9Q8R1J3 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
Zcchc9Q8R1J3 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC25.54■■□□□ 1.68
Zcchc9Q8R1J3 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
Zcchc9Q8R1J3 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
Zcchc9Q8R1J3 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
Zcchc9Q8R1J3 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC25.52■■□□□ 1.68
Zcchc9Q8R1J3 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
Zcchc9Q8R1J3 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC25.52■■□□□ 1.68
Zcchc9Q8R1J3 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
Zcchc9Q8R1J3 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC25.51■■□□□ 1.67
Zcchc9Q8R1J3 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
Zcchc9Q8R1J3 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC25.49■■□□□ 1.67
Zcchc9Q8R1J3 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC25.48■■□□□ 1.67
Zcchc9Q8R1J3 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
Zcchc9Q8R1J3 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
Zcchc9Q8R1J3 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
Zcchc9Q8R1J3 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
Zcchc9Q8R1J3 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC25.46■■□□□ 1.67
Zcchc9Q8R1J3 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC25.45■■□□□ 1.66
Zcchc9Q8R1J3 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC25.45■■□□□ 1.66
Zcchc9Q8R1J3 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC25.45■■□□□ 1.66
Zcchc9Q8R1J3 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
Zcchc9Q8R1J3 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
Zcchc9Q8R1J3 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC25.42■■□□□ 1.66
Zcchc9Q8R1J3 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
Zcchc9Q8R1J3 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
Retrieved 100 of 76,532 protein–RNA pairs in 21.6 ms