Protein–RNA interactions for Protein: Q8R0S1

Atf7, Cyclic AMP-dependent transcription factor ATF-7, mousemouse

Predictions only

Length 413 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf7Q8R0S1 AC166822.3-201ENSMUST00000227394 661 ntBASIC31.2■■■□□ 2.59
Atf7Q8R0S1 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC31.18■■■□□ 2.58
Atf7Q8R0S1 Gm26115-201ENSMUST00000175605 87 ntBASIC31.17■■■□□ 2.58
Atf7Q8R0S1 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC31.16■■■□□ 2.58
Atf7Q8R0S1 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC31.14■■■□□ 2.58
Atf7Q8R0S1 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC31.14■■■□□ 2.58
Atf7Q8R0S1 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC31.13■■■□□ 2.57
Atf7Q8R0S1 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC31.12■■■□□ 2.57
Atf7Q8R0S1 Gm8109-201ENSMUST00000194076 746 ntBASIC31.11■■■□□ 2.57
Atf7Q8R0S1 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC31.07■■■□□ 2.56
Atf7Q8R0S1 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC31.06■■■□□ 2.56
Atf7Q8R0S1 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC31.02■■■□□ 2.56
Atf7Q8R0S1 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC31■■■□□ 2.55
Atf7Q8R0S1 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC30.99■■■□□ 2.55
Atf7Q8R0S1 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC30.98■■■□□ 2.55
Atf7Q8R0S1 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC30.97■■■□□ 2.55
Atf7Q8R0S1 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC30.97■■■□□ 2.55
Atf7Q8R0S1 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC30.97■■■□□ 2.55
Atf7Q8R0S1 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC30.95■■■□□ 2.55
Atf7Q8R0S1 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC30.93■■■□□ 2.54
Atf7Q8R0S1 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC30.91■■■□□ 2.54
Atf7Q8R0S1 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC30.88■■■□□ 2.53
Atf7Q8R0S1 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC30.86■■■□□ 2.53
Atf7Q8R0S1 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC30.85■■■□□ 2.53
Atf7Q8R0S1 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC30.84■■■□□ 2.53
Atf7Q8R0S1 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC30.82■■■□□ 2.52
Atf7Q8R0S1 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC30.8■■■□□ 2.52
Atf7Q8R0S1 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC30.8■■■□□ 2.52
Atf7Q8R0S1 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC30.79■■■□□ 2.52
Atf7Q8R0S1 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC30.78■■■□□ 2.52
Atf7Q8R0S1 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC30.77■■■□□ 2.52
Atf7Q8R0S1 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC30.77■■■□□ 2.52
Atf7Q8R0S1 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC30.77■■■□□ 2.52
Atf7Q8R0S1 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC30.72■■■□□ 2.51
Atf7Q8R0S1 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC30.71■■■□□ 2.51
Atf7Q8R0S1 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC30.71■■■□□ 2.51
Atf7Q8R0S1 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC30.71■■■□□ 2.51
Atf7Q8R0S1 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC30.7■■■□□ 2.51
Atf7Q8R0S1 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC30.67■■■□□ 2.5
Atf7Q8R0S1 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC30.67■■■□□ 2.5
Atf7Q8R0S1 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC30.66■■■□□ 2.5
Atf7Q8R0S1 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC30.66■■■□□ 2.5
Atf7Q8R0S1 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC30.64■■■□□ 2.5
Atf7Q8R0S1 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC30.64■■■□□ 2.49
Atf7Q8R0S1 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC30.64■■■□□ 2.49
Atf7Q8R0S1 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC30.63■■■□□ 2.49
Atf7Q8R0S1 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC30.63■■■□□ 2.49
Atf7Q8R0S1 AC153504.1-201ENSMUST00000218379 2290 ntBASIC30.62■■■□□ 2.49
Atf7Q8R0S1 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC30.61■■■□□ 2.49
Atf7Q8R0S1 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC30.61■■■□□ 2.49
Atf7Q8R0S1 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC30.61■■■□□ 2.49
Atf7Q8R0S1 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC30.6■■■□□ 2.49
Atf7Q8R0S1 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC30.6■■■□□ 2.49
Atf7Q8R0S1 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC30.59■■■□□ 2.49
Atf7Q8R0S1 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC30.58■■■□□ 2.49
Atf7Q8R0S1 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC30.57■■■□□ 2.48
Atf7Q8R0S1 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC30.55■■■□□ 2.48
Atf7Q8R0S1 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC30.53■■■□□ 2.48
Atf7Q8R0S1 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC30.52■■■□□ 2.48
Atf7Q8R0S1 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC30.51■■■□□ 2.47
Atf7Q8R0S1 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC30.51■■■□□ 2.47
Atf7Q8R0S1 Peli2-204ENSMUST00000226513 1320 ntBASIC30.48■■■□□ 2.47
Atf7Q8R0S1 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC30.48■■■□□ 2.47
Atf7Q8R0S1 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC30.47■■■□□ 2.47
Atf7Q8R0S1 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC30.47■■■□□ 2.47
Atf7Q8R0S1 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC30.46■■■□□ 2.47
Atf7Q8R0S1 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC30.45■■■□□ 2.47
Atf7Q8R0S1 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC30.45■■■□□ 2.47
Atf7Q8R0S1 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC30.45■■■□□ 2.47
Atf7Q8R0S1 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC30.44■■■□□ 2.46
Atf7Q8R0S1 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC30.43■■■□□ 2.46
Atf7Q8R0S1 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC30.42■■■□□ 2.46
Atf7Q8R0S1 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC30.41■■■□□ 2.46
Atf7Q8R0S1 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC30.41■■■□□ 2.46
Atf7Q8R0S1 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC30.41■■■□□ 2.46
Atf7Q8R0S1 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC30.4■■■□□ 2.46
Atf7Q8R0S1 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC30.37■■■□□ 2.45
Atf7Q8R0S1 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC30.37■■■□□ 2.45
Atf7Q8R0S1 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC30.36■■■□□ 2.45
Atf7Q8R0S1 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC30.36■■■□□ 2.45
Atf7Q8R0S1 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC30.34■■■□□ 2.45
Atf7Q8R0S1 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC30.34■■■□□ 2.45
Atf7Q8R0S1 Gm24804-201ENSMUST00000174982 85 ntBASIC30.33■■■□□ 2.45
Atf7Q8R0S1 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC30.32■■■□□ 2.44
Atf7Q8R0S1 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC30.32■■■□□ 2.44
Atf7Q8R0S1 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC30.32■■■□□ 2.44
Atf7Q8R0S1 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC30.32■■■□□ 2.44
Atf7Q8R0S1 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC30.29■■■□□ 2.44
Atf7Q8R0S1 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC30.29■■■□□ 2.44
Atf7Q8R0S1 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC30.29■■■□□ 2.44
Atf7Q8R0S1 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC30.28■■■□□ 2.44
Atf7Q8R0S1 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC30.28■■■□□ 2.44
Atf7Q8R0S1 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC30.27■■■□□ 2.44
Atf7Q8R0S1 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC30.27■■■□□ 2.44
Atf7Q8R0S1 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC30.27■■■□□ 2.44
Atf7Q8R0S1 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC30.25■■■□□ 2.43
Atf7Q8R0S1 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC30.22■■■□□ 2.43
Atf7Q8R0S1 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC30.21■■■□□ 2.43
Atf7Q8R0S1 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC30.21■■■□□ 2.43
Atf7Q8R0S1 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC30.2■■■□□ 2.43
Retrieved 100 of 76,532 protein–RNA pairs in 101.4 ms