Protein–RNA interactions for Protein: Q8R043

Smim29, Uncharacterized protein SMIM29, mousemouse

Predictions only

Length 75 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smim29Q8R043 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Smim29Q8R043 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Smim29Q8R043 Gm25262-201ENSMUST00000174934 133 ntBASIC16.53■□□□□ 0.24
Smim29Q8R043 Mipep-204ENSMUST00000225043 1548 ntBASIC16.53■□□□□ 0.24
Smim29Q8R043 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Smim29Q8R043 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
Smim29Q8R043 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
Smim29Q8R043 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC16.52■□□□□ 0.23
Smim29Q8R043 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Smim29Q8R043 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC16.51■□□□□ 0.23
Smim29Q8R043 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Smim29Q8R043 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Smim29Q8R043 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Smim29Q8R043 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC16.49■□□□□ 0.23
Smim29Q8R043 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Smim29Q8R043 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Smim29Q8R043 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
Smim29Q8R043 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Smim29Q8R043 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC16.45■□□□□ 0.22
Smim29Q8R043 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Smim29Q8R043 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Smim29Q8R043 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
Smim29Q8R043 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Smim29Q8R043 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Smim29Q8R043 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Smim29Q8R043 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Smim29Q8R043 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Smim29Q8R043 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Smim29Q8R043 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Smim29Q8R043 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Smim29Q8R043 Gm6206-201ENSMUST00000133472 2199 ntBASIC16.34■□□□□ 0.21
Smim29Q8R043 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Smim29Q8R043 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC16.31■□□□□ 0.2
Smim29Q8R043 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Smim29Q8R043 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Smim29Q8R043 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Smim29Q8R043 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Smim29Q8R043 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Smim29Q8R043 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Smim29Q8R043 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Smim29Q8R043 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC16.3■□□□□ 0.2
Smim29Q8R043 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Smim29Q8R043 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Smim29Q8R043 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Smim29Q8R043 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC16.28■□□□□ 0.2
Smim29Q8R043 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Smim29Q8R043 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Smim29Q8R043 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
Smim29Q8R043 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Smim29Q8R043 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC16.27■□□□□ 0.19
Smim29Q8R043 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC16.25■□□□□ 0.19
Smim29Q8R043 Zxda-201ENSMUST00000117281 2621 ntBASIC16.25■□□□□ 0.19
Smim29Q8R043 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Smim29Q8R043 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Smim29Q8R043 Gm17082-201ENSMUST00000166043 1091 ntBASIC16.23■□□□□ 0.19
Smim29Q8R043 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
Smim29Q8R043 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC16.22■□□□□ 0.19
Smim29Q8R043 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Smim29Q8R043 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC16.22■□□□□ 0.19
Smim29Q8R043 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Smim29Q8R043 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Smim29Q8R043 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Smim29Q8R043 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC16.21■□□□□ 0.18
Smim29Q8R043 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
Smim29Q8R043 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
Smim29Q8R043 Gm9905-201ENSMUST00000065740 1845 ntBASIC16.2■□□□□ 0.18
Smim29Q8R043 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
Smim29Q8R043 Gm27322-201ENSMUST00000184007 104 ntBASIC16.19■□□□□ 0.18
Smim29Q8R043 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
Smim29Q8R043 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC16.18■□□□□ 0.18
Smim29Q8R043 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
Smim29Q8R043 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Smim29Q8R043 Gm43445-201ENSMUST00000198564 2091 ntBASIC16.16■□□□□ 0.18
Smim29Q8R043 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
Smim29Q8R043 AC166822.3-201ENSMUST00000227394 661 ntBASIC16.16■□□□□ 0.18
Smim29Q8R043 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Smim29Q8R043 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Smim29Q8R043 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Smim29Q8R043 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Smim29Q8R043 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Smim29Q8R043 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Smim29Q8R043 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC16.13■□□□□ 0.17
Smim29Q8R043 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Smim29Q8R043 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC16.12■□□□□ 0.17
Smim29Q8R043 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Smim29Q8R043 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Smim29Q8R043 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Smim29Q8R043 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Smim29Q8R043 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Smim29Q8R043 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Smim29Q8R043 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Smim29Q8R043 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Smim29Q8R043 Amer2-203ENSMUST00000225247 2662 ntBASIC16.09■□□□□ 0.17
Smim29Q8R043 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Smim29Q8R043 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
Smim29Q8R043 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Smim29Q8R043 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Smim29Q8R043 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Smim29Q8R043 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
Smim29Q8R043 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 61 ms