Protein–RNA interactions for Protein: Q8R043

Smim29, Uncharacterized protein SMIM29, mousemouse

Predictions only

Length 75 aa.

Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smim29Q8R043 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Smim29Q8R043 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Smim29Q8R043 Gm25262-201ENSMUST00000174934 133 ntBASIC16.53■□□□□ 0.24
Smim29Q8R043 Mipep-204ENSMUST00000225043 1548 ntBASIC16.53■□□□□ 0.24
Smim29Q8R043 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Smim29Q8R043 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
Smim29Q8R043 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
Smim29Q8R043 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC16.52■□□□□ 0.23
Smim29Q8R043 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Smim29Q8R043 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC16.51■□□□□ 0.23
Smim29Q8R043 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Smim29Q8R043 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Smim29Q8R043 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Smim29Q8R043 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC16.49■□□□□ 0.23
Smim29Q8R043 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Smim29Q8R043 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Smim29Q8R043 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
Smim29Q8R043 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Smim29Q8R043 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC16.45■□□□□ 0.22
Smim29Q8R043 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Smim29Q8R043 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Smim29Q8R043 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
Smim29Q8R043 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Smim29Q8R043 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Smim29Q8R043 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Smim29Q8R043 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Smim29Q8R043 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Smim29Q8R043 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Smim29Q8R043 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Smim29Q8R043 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Smim29Q8R043 Gm6206-201ENSMUST00000133472 2199 ntBASIC16.34■□□□□ 0.21
Smim29Q8R043 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Smim29Q8R043 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC16.31■□□□□ 0.2
Smim29Q8R043 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Smim29Q8R043 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Smim29Q8R043 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Smim29Q8R043 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Smim29Q8R043 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Smim29Q8R043 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Smim29Q8R043 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Smim29Q8R043 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC16.3■□□□□ 0.2
Smim29Q8R043 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Smim29Q8R043 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Smim29Q8R043 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Smim29Q8R043 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC16.28■□□□□ 0.2
Smim29Q8R043 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Smim29Q8R043 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Smim29Q8R043 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
Smim29Q8R043 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Smim29Q8R043 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC16.27■□□□□ 0.19
Smim29Q8R043 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC16.25■□□□□ 0.19
Smim29Q8R043 Zxda-201ENSMUST00000117281 2621 ntBASIC16.25■□□□□ 0.19
Smim29Q8R043 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Smim29Q8R043 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Smim29Q8R043 Gm17082-201ENSMUST00000166043 1091 ntBASIC16.23■□□□□ 0.19
Smim29Q8R043 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
Smim29Q8R043 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC16.22■□□□□ 0.19
Smim29Q8R043 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Smim29Q8R043 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC16.22■□□□□ 0.19
Smim29Q8R043 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Smim29Q8R043 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Smim29Q8R043 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Smim29Q8R043 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC16.21■□□□□ 0.18
Smim29Q8R043 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
Smim29Q8R043 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
Smim29Q8R043 Gm9905-201ENSMUST00000065740 1845 ntBASIC16.2■□□□□ 0.18
Smim29Q8R043 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
Smim29Q8R043 Gm27322-201ENSMUST00000184007 104 ntBASIC16.19■□□□□ 0.18
Smim29Q8R043 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
Smim29Q8R043 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC16.18■□□□□ 0.18
Smim29Q8R043 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
Smim29Q8R043 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Smim29Q8R043 Gm43445-201ENSMUST00000198564 2091 ntBASIC16.16■□□□□ 0.18
Smim29Q8R043 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
Smim29Q8R043 AC166822.3-201ENSMUST00000227394 661 ntBASIC16.16■□□□□ 0.18
Smim29Q8R043 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Smim29Q8R043 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Smim29Q8R043 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Smim29Q8R043 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Smim29Q8R043 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Smim29Q8R043 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Smim29Q8R043 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC16.13■□□□□ 0.17
Smim29Q8R043 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Smim29Q8R043 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC16.12■□□□□ 0.17
Smim29Q8R043 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Smim29Q8R043 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Smim29Q8R043 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Smim29Q8R043 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Smim29Q8R043 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Smim29Q8R043 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Smim29Q8R043 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Smim29Q8R043 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Smim29Q8R043 Amer2-203ENSMUST00000225247 2662 ntBASIC16.09■□□□□ 0.17
Smim29Q8R043 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Smim29Q8R043 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
Smim29Q8R043 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Smim29Q8R043 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Smim29Q8R043 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Smim29Q8R043 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
Smim29Q8R043 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 18 ms