Protein–RNA interactions for Protein: Q8CG50

Rab43, Ras-related protein Rab-43, mousemouse

Predictions only

Length 210 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab43Q8CG50 Tdp2-203ENSMUST00000223804 1136 ntBASIC26.02■■□□□ 1.76
Rab43Q8CG50 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC26■■□□□ 1.75
Rab43Q8CG50 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC25.97■■□□□ 1.75
Rab43Q8CG50 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
Rab43Q8CG50 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC25.95■■□□□ 1.74
Rab43Q8CG50 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC25.95■■□□□ 1.74
Rab43Q8CG50 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
Rab43Q8CG50 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
Rab43Q8CG50 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC25.93■■□□□ 1.74
Rab43Q8CG50 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
Rab43Q8CG50 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC25.92■■□□□ 1.74
Rab43Q8CG50 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
Rab43Q8CG50 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC25.89■■□□□ 1.74
Rab43Q8CG50 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
Rab43Q8CG50 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC25.88■■□□□ 1.73
Rab43Q8CG50 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
Rab43Q8CG50 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC25.87■■□□□ 1.73
Rab43Q8CG50 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
Rab43Q8CG50 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC25.84■■□□□ 1.73
Rab43Q8CG50 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
Rab43Q8CG50 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC25.79■■□□□ 1.72
Rab43Q8CG50 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC25.78■■□□□ 1.72
Rab43Q8CG50 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC25.78■■□□□ 1.72
Rab43Q8CG50 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC25.74■■□□□ 1.71
Rab43Q8CG50 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC25.74■■□□□ 1.71
Rab43Q8CG50 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
Rab43Q8CG50 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC25.72■■□□□ 1.71
Rab43Q8CG50 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC25.72■■□□□ 1.71
Rab43Q8CG50 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
Rab43Q8CG50 Gm45855-201ENSMUST00000212546 880 ntBASIC25.71■■□□□ 1.71
Rab43Q8CG50 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC25.69■■□□□ 1.7
Rab43Q8CG50 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
Rab43Q8CG50 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
Rab43Q8CG50 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC25.67■■□□□ 1.7
Rab43Q8CG50 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC25.64■■□□□ 1.7
Rab43Q8CG50 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
Rab43Q8CG50 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
Rab43Q8CG50 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
Rab43Q8CG50 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC25.61■■□□□ 1.69
Rab43Q8CG50 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
Rab43Q8CG50 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
Rab43Q8CG50 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC25.6■■□□□ 1.69
Rab43Q8CG50 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
Rab43Q8CG50 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC25.59■■□□□ 1.69
Rab43Q8CG50 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC25.58■■□□□ 1.69
Rab43Q8CG50 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
Rab43Q8CG50 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
Rab43Q8CG50 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
Rab43Q8CG50 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
Rab43Q8CG50 Gm9397-201ENSMUST00000200125 605 ntBASIC25.52■■□□□ 1.68
Rab43Q8CG50 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
Rab43Q8CG50 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
Rab43Q8CG50 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC25.48■■□□□ 1.67
Rab43Q8CG50 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC25.48■■□□□ 1.67
Rab43Q8CG50 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC25.48■■□□□ 1.67
Rab43Q8CG50 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC25.47■■□□□ 1.67
Rab43Q8CG50 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC25.46■■□□□ 1.67
Rab43Q8CG50 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC25.45■■□□□ 1.66
Rab43Q8CG50 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
Rab43Q8CG50 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC25.43■■□□□ 1.66
Rab43Q8CG50 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC25.43■■□□□ 1.66
Rab43Q8CG50 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
Rab43Q8CG50 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC25.42■■□□□ 1.66
Rab43Q8CG50 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC25.41■■□□□ 1.66
Rab43Q8CG50 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
Rab43Q8CG50 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC25.39■■□□□ 1.66
Rab43Q8CG50 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC25.38■■□□□ 1.65
Rab43Q8CG50 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
Rab43Q8CG50 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
Rab43Q8CG50 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
Rab43Q8CG50 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC25.37■■□□□ 1.65
Rab43Q8CG50 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
Rab43Q8CG50 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
Rab43Q8CG50 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC25.35■■□□□ 1.65
Rab43Q8CG50 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
Rab43Q8CG50 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC25.34■■□□□ 1.65
Rab43Q8CG50 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
Rab43Q8CG50 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
Rab43Q8CG50 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC25.32■■□□□ 1.64
Rab43Q8CG50 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC25.32■■□□□ 1.64
Rab43Q8CG50 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC25.31■■□□□ 1.64
Rab43Q8CG50 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC25.3■■□□□ 1.64
Rab43Q8CG50 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
Rab43Q8CG50 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC25.29■■□□□ 1.64
Rab43Q8CG50 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC25.29■■□□□ 1.64
Rab43Q8CG50 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
Rab43Q8CG50 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC25.29■■□□□ 1.64
Rab43Q8CG50 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
Rab43Q8CG50 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
Rab43Q8CG50 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC25.25■■□□□ 1.63
Rab43Q8CG50 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC25.24■■□□□ 1.63
Rab43Q8CG50 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC25.23■■□□□ 1.63
Rab43Q8CG50 Gm24970-201ENSMUST00000175582 82 ntBASIC25.23■■□□□ 1.63
Rab43Q8CG50 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC25.22■■□□□ 1.63
Rab43Q8CG50 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
Rab43Q8CG50 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
Rab43Q8CG50 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC25.21■■□□□ 1.63
Rab43Q8CG50 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC25.2■■□□□ 1.62
Rab43Q8CG50 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC25.2■■□□□ 1.62
Rab43Q8CG50 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC25.19■■□□□ 1.62
Retrieved 100 of 76,532 protein–RNA pairs in 24.5 ms