Protein–RNA interactions for Protein: Q8CE50

Snx30, Sorting nexin-30, mousemouse

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snx30Q8CE50 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
Snx30Q8CE50 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC26.79■■□□□ 1.88
Snx30Q8CE50 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC26.79■■□□□ 1.88
Snx30Q8CE50 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
Snx30Q8CE50 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
Snx30Q8CE50 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC26.73■■□□□ 1.87
Snx30Q8CE50 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC26.72■■□□□ 1.87
Snx30Q8CE50 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC26.72■■□□□ 1.87
Snx30Q8CE50 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC26.72■■□□□ 1.87
Snx30Q8CE50 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.87
Snx30Q8CE50 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC26.7■■□□□ 1.87
Snx30Q8CE50 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
Snx30Q8CE50 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
Snx30Q8CE50 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
Snx30Q8CE50 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC26.66■■□□□ 1.86
Snx30Q8CE50 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
Snx30Q8CE50 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC26.64■■□□□ 1.85
Snx30Q8CE50 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.85
Snx30Q8CE50 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC26.64■■□□□ 1.85
Snx30Q8CE50 Gm2415-204ENSMUST00000190235 2004 ntBASIC26.63■■□□□ 1.85
Snx30Q8CE50 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
Snx30Q8CE50 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
Snx30Q8CE50 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
Snx30Q8CE50 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC26.58■■□□□ 1.85
Snx30Q8CE50 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
Snx30Q8CE50 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC26.52■■□□□ 1.84
Snx30Q8CE50 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC26.52■■□□□ 1.84
Snx30Q8CE50 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
Snx30Q8CE50 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
Snx30Q8CE50 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC26.49■■□□□ 1.83
Snx30Q8CE50 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
Snx30Q8CE50 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC26.47■■□□□ 1.83
Snx30Q8CE50 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
Snx30Q8CE50 Gm24804-201ENSMUST00000174982 85 ntBASIC26.45■■□□□ 1.82
Snx30Q8CE50 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC26.45■■□□□ 1.82
Snx30Q8CE50 Gm6658-202ENSMUST00000209493 1885 ntBASIC26.45■■□□□ 1.82
Snx30Q8CE50 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
Snx30Q8CE50 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
Snx30Q8CE50 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC26.42■■□□□ 1.82
Snx30Q8CE50 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC26.39■■□□□ 1.82
Snx30Q8CE50 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
Snx30Q8CE50 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC26.39■■□□□ 1.82
Snx30Q8CE50 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC26.38■■□□□ 1.81
Snx30Q8CE50 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC26.37■■□□□ 1.81
Snx30Q8CE50 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
Snx30Q8CE50 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
Snx30Q8CE50 AC153504.1-201ENSMUST00000218379 2290 ntBASIC26.36■■□□□ 1.81
Snx30Q8CE50 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
Snx30Q8CE50 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC26.36■■□□□ 1.81
Snx30Q8CE50 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC26.35■■□□□ 1.81
Snx30Q8CE50 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
Snx30Q8CE50 Peli2-204ENSMUST00000226513 1320 ntBASIC26.34■■□□□ 1.81
Snx30Q8CE50 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
Snx30Q8CE50 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
Snx30Q8CE50 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC26.3■■□□□ 1.8
Snx30Q8CE50 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
Snx30Q8CE50 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC26.26■■□□□ 1.79
Snx30Q8CE50 Zxda-201ENSMUST00000117281 2621 ntBASIC26.26■■□□□ 1.79
Snx30Q8CE50 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC26.25■■□□□ 1.79
Snx30Q8CE50 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
Snx30Q8CE50 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
Snx30Q8CE50 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
Snx30Q8CE50 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC26.2■■□□□ 1.79
Snx30Q8CE50 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.79
Snx30Q8CE50 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC26.2■■□□□ 1.78
Snx30Q8CE50 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC26.2■■□□□ 1.78
Snx30Q8CE50 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC26.2■■□□□ 1.78
Snx30Q8CE50 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
Snx30Q8CE50 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
Snx30Q8CE50 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC26.17■■□□□ 1.78
Snx30Q8CE50 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
Snx30Q8CE50 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
Snx30Q8CE50 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
Snx30Q8CE50 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC26.14■■□□□ 1.78
Snx30Q8CE50 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC26.14■■□□□ 1.78
Snx30Q8CE50 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC26.12■■□□□ 1.77
Snx30Q8CE50 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC26.1■■□□□ 1.77
Snx30Q8CE50 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
Snx30Q8CE50 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC26.09■■□□□ 1.77
Snx30Q8CE50 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC26.09■■□□□ 1.77
Snx30Q8CE50 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
Snx30Q8CE50 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
Snx30Q8CE50 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
Snx30Q8CE50 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC26.06■■□□□ 1.76
Snx30Q8CE50 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC26.05■■□□□ 1.76
Snx30Q8CE50 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC26.05■■□□□ 1.76
Snx30Q8CE50 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
Snx30Q8CE50 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC26.03■■□□□ 1.76
Snx30Q8CE50 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC26.03■■□□□ 1.76
Snx30Q8CE50 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC26.02■■□□□ 1.76
Snx30Q8CE50 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
Snx30Q8CE50 Gm16148-201ENSMUST00000119653 893 ntBASIC26.01■■□□□ 1.75
Snx30Q8CE50 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC26■■□□□ 1.75
Snx30Q8CE50 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC26■■□□□ 1.75
Snx30Q8CE50 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC25.97■■□□□ 1.75
Snx30Q8CE50 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC25.97■■□□□ 1.75
Snx30Q8CE50 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC25.97■■□□□ 1.75
Snx30Q8CE50 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC25.96■■□□□ 1.75
Snx30Q8CE50 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
Snx30Q8CE50 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC25.95■■□□□ 1.74
Retrieved 100 of 76,532 protein–RNA pairs in 10.7 ms