Protein–RNA interactions for Protein: Q8CDY9

Pcdhb7, Protocadherin beta 7, mousemouse

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb7Q8CDY9 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC25.99■■□□□ 1.75
Pcdhb7Q8CDY9 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC25.96■■□□□ 1.75
Pcdhb7Q8CDY9 Gm8109-201ENSMUST00000194076 746 ntBASIC25.96■■□□□ 1.75
Pcdhb7Q8CDY9 Gm2415-204ENSMUST00000190235 2004 ntBASIC25.96■■□□□ 1.75
Pcdhb7Q8CDY9 AC153504.1-201ENSMUST00000218379 2290 ntBASIC25.95■■□□□ 1.75
Pcdhb7Q8CDY9 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
Pcdhb7Q8CDY9 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
Pcdhb7Q8CDY9 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC25.91■■□□□ 1.74
Pcdhb7Q8CDY9 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC25.91■■□□□ 1.74
Pcdhb7Q8CDY9 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC25.89■■□□□ 1.74
Pcdhb7Q8CDY9 AC166822.3-201ENSMUST00000227394 661 ntBASIC25.89■■□□□ 1.74
Pcdhb7Q8CDY9 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC25.88■■□□□ 1.73
Pcdhb7Q8CDY9 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC25.86■■□□□ 1.73
Pcdhb7Q8CDY9 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC25.83■■□□□ 1.73
Pcdhb7Q8CDY9 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC25.82■■□□□ 1.72
Pcdhb7Q8CDY9 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC25.8■■□□□ 1.72
Pcdhb7Q8CDY9 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC25.75■■□□□ 1.71
Pcdhb7Q8CDY9 Gm6658-202ENSMUST00000209493 1885 ntBASIC25.73■■□□□ 1.71
Pcdhb7Q8CDY9 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
Pcdhb7Q8CDY9 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC25.71■■□□□ 1.71
Pcdhb7Q8CDY9 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
Pcdhb7Q8CDY9 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
Pcdhb7Q8CDY9 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
Pcdhb7Q8CDY9 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC25.67■■□□□ 1.7
Pcdhb7Q8CDY9 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC25.67■■□□□ 1.7
Pcdhb7Q8CDY9 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
Pcdhb7Q8CDY9 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
Pcdhb7Q8CDY9 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC25.66■■□□□ 1.7
Pcdhb7Q8CDY9 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
Pcdhb7Q8CDY9 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC25.64■■□□□ 1.7
Pcdhb7Q8CDY9 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC25.64■■□□□ 1.69
Pcdhb7Q8CDY9 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC25.64■■□□□ 1.69
Pcdhb7Q8CDY9 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
Pcdhb7Q8CDY9 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
Pcdhb7Q8CDY9 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
Pcdhb7Q8CDY9 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
Pcdhb7Q8CDY9 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC25.59■■□□□ 1.69
Pcdhb7Q8CDY9 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
Pcdhb7Q8CDY9 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC25.54■■□□□ 1.68
Pcdhb7Q8CDY9 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC25.53■■□□□ 1.68
Pcdhb7Q8CDY9 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
Pcdhb7Q8CDY9 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
Pcdhb7Q8CDY9 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC25.5■■□□□ 1.67
Pcdhb7Q8CDY9 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
Pcdhb7Q8CDY9 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
Pcdhb7Q8CDY9 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC25.47■■□□□ 1.67
Pcdhb7Q8CDY9 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC25.46■■□□□ 1.67
Pcdhb7Q8CDY9 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
Pcdhb7Q8CDY9 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC25.46■■□□□ 1.67
Pcdhb7Q8CDY9 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC25.46■■□□□ 1.67
Pcdhb7Q8CDY9 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC25.45■■□□□ 1.66
Pcdhb7Q8CDY9 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
Pcdhb7Q8CDY9 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
Pcdhb7Q8CDY9 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC25.43■■□□□ 1.66
Pcdhb7Q8CDY9 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
Pcdhb7Q8CDY9 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC25.41■■□□□ 1.66
Pcdhb7Q8CDY9 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
Pcdhb7Q8CDY9 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC25.4■■□□□ 1.66
Pcdhb7Q8CDY9 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.65
Pcdhb7Q8CDY9 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC25.39■■□□□ 1.65
Pcdhb7Q8CDY9 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.65
Pcdhb7Q8CDY9 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
Pcdhb7Q8CDY9 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC25.38■■□□□ 1.65
Pcdhb7Q8CDY9 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC25.38■■□□□ 1.65
Pcdhb7Q8CDY9 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
Pcdhb7Q8CDY9 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
Pcdhb7Q8CDY9 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
Pcdhb7Q8CDY9 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC25.36■■□□□ 1.65
Pcdhb7Q8CDY9 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
Pcdhb7Q8CDY9 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
Pcdhb7Q8CDY9 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC25.34■■□□□ 1.65
Pcdhb7Q8CDY9 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC25.34■■□□□ 1.65
Pcdhb7Q8CDY9 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
Pcdhb7Q8CDY9 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC25.31■■□□□ 1.64
Pcdhb7Q8CDY9 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
Pcdhb7Q8CDY9 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
Pcdhb7Q8CDY9 Peli2-204ENSMUST00000226513 1320 ntBASIC25.3■■□□□ 1.64
Pcdhb7Q8CDY9 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
Pcdhb7Q8CDY9 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC25.29■■□□□ 1.64
Pcdhb7Q8CDY9 Gm24804-201ENSMUST00000174982 85 ntBASIC25.28■■□□□ 1.64
Pcdhb7Q8CDY9 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
Pcdhb7Q8CDY9 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC25.27■■□□□ 1.64
Pcdhb7Q8CDY9 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC25.25■■□□□ 1.63
Pcdhb7Q8CDY9 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC25.25■■□□□ 1.63
Pcdhb7Q8CDY9 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC25.25■■□□□ 1.63
Pcdhb7Q8CDY9 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
Pcdhb7Q8CDY9 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC25.23■■□□□ 1.63
Pcdhb7Q8CDY9 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC25.21■■□□□ 1.63
Pcdhb7Q8CDY9 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
Pcdhb7Q8CDY9 Gm6206-201ENSMUST00000133472 2199 ntBASIC25.2■■□□□ 1.62
Pcdhb7Q8CDY9 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
Pcdhb7Q8CDY9 Gm9905-201ENSMUST00000065740 1845 ntBASIC25.19■■□□□ 1.62
Pcdhb7Q8CDY9 Zxda-201ENSMUST00000117281 2621 ntBASIC25.17■■□□□ 1.62
Pcdhb7Q8CDY9 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
Pcdhb7Q8CDY9 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
Pcdhb7Q8CDY9 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
Pcdhb7Q8CDY9 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
Pcdhb7Q8CDY9 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC25.17■■□□□ 1.62
Pcdhb7Q8CDY9 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC25.14■■□□□ 1.61
Pcdhb7Q8CDY9 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC25.13■■□□□ 1.61
Retrieved 100 of 76,532 protein–RNA pairs in 33.1 ms