Protein–RNA interactions for Protein: Q8CDV0

Ccdc178, Coiled-coil domain-containing protein 178, mousemouse

Predictions only

Length 866 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc178Q8CDV0 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC30.88■■■□□ 2.53
Ccdc178Q8CDV0 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC30.86■■■□□ 2.53
Ccdc178Q8CDV0 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC30.86■■■□□ 2.53
Ccdc178Q8CDV0 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC30.84■■■□□ 2.53
Ccdc178Q8CDV0 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC30.84■■■□□ 2.53
Ccdc178Q8CDV0 Gm2415-204ENSMUST00000190235 2004 ntBASIC30.84■■■□□ 2.53
Ccdc178Q8CDV0 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC30.83■■■□□ 2.53
Ccdc178Q8CDV0 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC30.83■■■□□ 2.53
Ccdc178Q8CDV0 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC30.82■■■□□ 2.53
Ccdc178Q8CDV0 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC30.82■■■□□ 2.52
Ccdc178Q8CDV0 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC30.82■■■□□ 2.52
Ccdc178Q8CDV0 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC30.81■■■□□ 2.52
Ccdc178Q8CDV0 Mipep-204ENSMUST00000225043 1548 ntBASIC30.81■■■□□ 2.52
Ccdc178Q8CDV0 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC30.79■■■□□ 2.52
Ccdc178Q8CDV0 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC30.79■■■□□ 2.52
Ccdc178Q8CDV0 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC30.78■■■□□ 2.52
Ccdc178Q8CDV0 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC30.78■■■□□ 2.52
Ccdc178Q8CDV0 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC30.77■■■□□ 2.52
Ccdc178Q8CDV0 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC30.77■■■□□ 2.52
Ccdc178Q8CDV0 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC30.75■■■□□ 2.51
Ccdc178Q8CDV0 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC30.75■■■□□ 2.51
Ccdc178Q8CDV0 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC30.71■■■□□ 2.51
Ccdc178Q8CDV0 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC30.71■■■□□ 2.51
Ccdc178Q8CDV0 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC30.7■■■□□ 2.5
Ccdc178Q8CDV0 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC30.66■■■□□ 2.5
Ccdc178Q8CDV0 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC30.65■■■□□ 2.5
Ccdc178Q8CDV0 AC153504.1-201ENSMUST00000218379 2290 ntBASIC30.63■■■□□ 2.49
Ccdc178Q8CDV0 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC30.63■■■□□ 2.49
Ccdc178Q8CDV0 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC30.62■■■□□ 2.49
Ccdc178Q8CDV0 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC30.62■■■□□ 2.49
Ccdc178Q8CDV0 Gm6658-202ENSMUST00000209493 1885 ntBASIC30.61■■■□□ 2.49
Ccdc178Q8CDV0 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC30.56■■■□□ 2.48
Ccdc178Q8CDV0 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC30.55■■■□□ 2.48
Ccdc178Q8CDV0 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC30.55■■■□□ 2.48
Ccdc178Q8CDV0 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC30.55■■■□□ 2.48
Ccdc178Q8CDV0 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC30.54■■■□□ 2.48
Ccdc178Q8CDV0 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC30.54■■■□□ 2.48
Ccdc178Q8CDV0 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC30.53■■■□□ 2.48
Ccdc178Q8CDV0 Peli2-204ENSMUST00000226513 1320 ntBASIC30.51■■■□□ 2.48
Ccdc178Q8CDV0 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC30.49■■■□□ 2.47
Ccdc178Q8CDV0 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC30.48■■■□□ 2.47
Ccdc178Q8CDV0 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC30.47■■■□□ 2.47
Ccdc178Q8CDV0 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC30.47■■■□□ 2.47
Ccdc178Q8CDV0 Gm16148-201ENSMUST00000119653 893 ntBASIC30.45■■■□□ 2.47
Ccdc178Q8CDV0 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC30.44■■■□□ 2.46
Ccdc178Q8CDV0 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC30.44■■■□□ 2.46
Ccdc178Q8CDV0 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC30.43■■■□□ 2.46
Ccdc178Q8CDV0 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC30.43■■■□□ 2.46
Ccdc178Q8CDV0 Zfp131-205ENSMUST00000223812 663 ntBASIC30.43■■■□□ 2.46
Ccdc178Q8CDV0 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC30.42■■■□□ 2.46
Ccdc178Q8CDV0 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC30.4■■■□□ 2.46
Ccdc178Q8CDV0 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC30.4■■■□□ 2.46
Ccdc178Q8CDV0 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC30.4■■■□□ 2.46
Ccdc178Q8CDV0 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC30.4■■■□□ 2.46
Ccdc178Q8CDV0 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC30.36■■■□□ 2.45
Ccdc178Q8CDV0 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC30.36■■■□□ 2.45
Ccdc178Q8CDV0 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC30.36■■■□□ 2.45
Ccdc178Q8CDV0 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC30.34■■■□□ 2.45
Ccdc178Q8CDV0 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC30.32■■■□□ 2.44
Ccdc178Q8CDV0 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC30.32■■■□□ 2.44
Ccdc178Q8CDV0 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC30.3■■■□□ 2.44
Ccdc178Q8CDV0 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC30.3■■■□□ 2.44
Ccdc178Q8CDV0 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC30.29■■■□□ 2.44
Ccdc178Q8CDV0 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC30.29■■■□□ 2.44
Ccdc178Q8CDV0 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC30.28■■■□□ 2.44
Ccdc178Q8CDV0 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC30.28■■■□□ 2.44
Ccdc178Q8CDV0 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC30.27■■■□□ 2.44
Ccdc178Q8CDV0 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC30.26■■■□□ 2.43
Ccdc178Q8CDV0 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC30.25■■■□□ 2.43
Ccdc178Q8CDV0 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC30.24■■■□□ 2.43
Ccdc178Q8CDV0 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC30.22■■■□□ 2.43
Ccdc178Q8CDV0 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC30.22■■■□□ 2.43
Ccdc178Q8CDV0 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC30.21■■■□□ 2.43
Ccdc178Q8CDV0 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC30.19■■■□□ 2.42
Ccdc178Q8CDV0 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC30.19■■■□□ 2.42
Ccdc178Q8CDV0 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC30.18■■■□□ 2.42
Ccdc178Q8CDV0 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC30.16■■■□□ 2.42
Ccdc178Q8CDV0 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC30.14■■■□□ 2.42
Ccdc178Q8CDV0 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC30.13■■■□□ 2.41
Ccdc178Q8CDV0 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC30.13■■■□□ 2.41
Ccdc178Q8CDV0 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC30.13■■■□□ 2.41
Ccdc178Q8CDV0 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC30.13■■■□□ 2.41
Ccdc178Q8CDV0 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC30.13■■■□□ 2.41
Ccdc178Q8CDV0 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC30.12■■■□□ 2.41
Ccdc178Q8CDV0 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC30.12■■■□□ 2.41
Ccdc178Q8CDV0 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC30.1■■■□□ 2.41
Ccdc178Q8CDV0 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC30.09■■■□□ 2.41
Ccdc178Q8CDV0 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC30.08■■■□□ 2.41
Ccdc178Q8CDV0 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC30.08■■■□□ 2.41
Ccdc178Q8CDV0 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC30.06■■■□□ 2.4
Ccdc178Q8CDV0 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC30.05■■■□□ 2.4
Ccdc178Q8CDV0 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC30.04■■■□□ 2.4
Ccdc178Q8CDV0 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC30■■■□□ 2.39
Ccdc178Q8CDV0 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC30■■■□□ 2.39
Ccdc178Q8CDV0 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC30■■■□□ 2.39
Ccdc178Q8CDV0 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC30■■■□□ 2.39
Ccdc178Q8CDV0 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC29.99■■■□□ 2.39
Ccdc178Q8CDV0 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC29.98■■■□□ 2.39
Ccdc178Q8CDV0 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC29.98■■■□□ 2.39
Ccdc178Q8CDV0 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC29.98■■■□□ 2.39
Retrieved 100 of 76,532 protein–RNA pairs in 91.8 ms