Protein–RNA interactions for Protein: Q8C2E4

Ptcd1, Pentatricopeptide repeat-containing protein 1, mitochondrial, mousemouse

Known RBP Predictions only

Length 695 aa.

Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptcd1Q8C2E4 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC33.05■■■□□ 2.88
Ptcd1Q8C2E4 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC33.05■■■□□ 2.88
Ptcd1Q8C2E4 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC33.05■■■□□ 2.88
Ptcd1Q8C2E4 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC33.05■■■□□ 2.88
Ptcd1Q8C2E4 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC33.04■■■□□ 2.88
Ptcd1Q8C2E4 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC33.03■■■□□ 2.88
Ptcd1Q8C2E4 Gm45855-201ENSMUST00000212546 880 ntBASIC33■■■□□ 2.87
Ptcd1Q8C2E4 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC32.97■■■□□ 2.87
Ptcd1Q8C2E4 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC32.96■■■□□ 2.87
Ptcd1Q8C2E4 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC32.95■■■□□ 2.86
Ptcd1Q8C2E4 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC32.92■■■□□ 2.86
Ptcd1Q8C2E4 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC32.92■■■□□ 2.86
Ptcd1Q8C2E4 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC32.87■■■□□ 2.85
Ptcd1Q8C2E4 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC32.86■■■□□ 2.85
Ptcd1Q8C2E4 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC32.86■■■□□ 2.85
Ptcd1Q8C2E4 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC32.85■■■□□ 2.85
Ptcd1Q8C2E4 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC32.83■■■□□ 2.85
Ptcd1Q8C2E4 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC32.82■■■□□ 2.84
Ptcd1Q8C2E4 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC32.8■■■□□ 2.84
Ptcd1Q8C2E4 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC32.78■■■□□ 2.84
Ptcd1Q8C2E4 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC32.76■■■□□ 2.83
Ptcd1Q8C2E4 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC32.7■■■□□ 2.83
Ptcd1Q8C2E4 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC32.7■■■□□ 2.83
Ptcd1Q8C2E4 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC32.69■■■□□ 2.82
Ptcd1Q8C2E4 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC32.68■■■□□ 2.82
Ptcd1Q8C2E4 Zfp131-207ENSMUST00000224946 1783 ntBASIC32.68■■■□□ 2.82
Ptcd1Q8C2E4 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC32.66■■■□□ 2.82
Ptcd1Q8C2E4 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC32.66■■■□□ 2.82
Ptcd1Q8C2E4 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC32.66■■■□□ 2.82
Ptcd1Q8C2E4 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC32.65■■■□□ 2.82
Ptcd1Q8C2E4 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC32.64■■■□□ 2.82
Ptcd1Q8C2E4 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC32.63■■■□□ 2.81
Ptcd1Q8C2E4 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC32.61■■■□□ 2.81
Ptcd1Q8C2E4 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC32.6■■■□□ 2.81
Ptcd1Q8C2E4 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC32.59■■■□□ 2.81
Ptcd1Q8C2E4 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC32.59■■■□□ 2.81
Ptcd1Q8C2E4 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC32.58■■■□□ 2.81
Ptcd1Q8C2E4 Gm9397-201ENSMUST00000200125 605 ntBASIC32.57■■■□□ 2.8
Ptcd1Q8C2E4 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC32.56■■■□□ 2.8
Ptcd1Q8C2E4 Gm5987-201ENSMUST00000196433 1151 ntBASIC32.55■■■□□ 2.8
Ptcd1Q8C2E4 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC32.55■■■□□ 2.8
Ptcd1Q8C2E4 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC32.53■■■□□ 2.8
Ptcd1Q8C2E4 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC32.53■■■□□ 2.8
Ptcd1Q8C2E4 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC32.53■■■□□ 2.8
Ptcd1Q8C2E4 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC32.52■■■□□ 2.8
Ptcd1Q8C2E4 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC32.51■■■□□ 2.79
Ptcd1Q8C2E4 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC32.51■■■□□ 2.79
Ptcd1Q8C2E4 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC32.5■■■□□ 2.79
Ptcd1Q8C2E4 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC32.5■■■□□ 2.79
Ptcd1Q8C2E4 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC32.48■■■□□ 2.79
Ptcd1Q8C2E4 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC32.47■■■□□ 2.79
Ptcd1Q8C2E4 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC32.47■■■□□ 2.79
Ptcd1Q8C2E4 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC32.47■■■□□ 2.79
Ptcd1Q8C2E4 Mipep-204ENSMUST00000225043 1548 ntBASIC32.45■■■□□ 2.78
Ptcd1Q8C2E4 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC32.44■■■□□ 2.78
Ptcd1Q8C2E4 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC32.44■■■□□ 2.78
Ptcd1Q8C2E4 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC32.43■■■□□ 2.78
Ptcd1Q8C2E4 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC32.42■■■□□ 2.78
Ptcd1Q8C2E4 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC32.41■■■□□ 2.78
Ptcd1Q8C2E4 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC32.4■■■□□ 2.78
Ptcd1Q8C2E4 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC32.39■■■□□ 2.78
Ptcd1Q8C2E4 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC32.39■■■□□ 2.78
Ptcd1Q8C2E4 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC32.38■■■□□ 2.77
Ptcd1Q8C2E4 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC32.38■■■□□ 2.77
Ptcd1Q8C2E4 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC32.38■■■□□ 2.77
Ptcd1Q8C2E4 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC32.34■■■□□ 2.77
Ptcd1Q8C2E4 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC32.33■■■□□ 2.77
Ptcd1Q8C2E4 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC32.32■■■□□ 2.76
Ptcd1Q8C2E4 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC32.31■■■□□ 2.76
Ptcd1Q8C2E4 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC32.3■■■□□ 2.76
Ptcd1Q8C2E4 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC32.29■■■□□ 2.76
Ptcd1Q8C2E4 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC32.28■■■□□ 2.76
Ptcd1Q8C2E4 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC32.28■■■□□ 2.76
Ptcd1Q8C2E4 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC32.28■■■□□ 2.76
Ptcd1Q8C2E4 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC32.25■■■□□ 2.75
Ptcd1Q8C2E4 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC32.25■■■□□ 2.75
Ptcd1Q8C2E4 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC32.24■■■□□ 2.75
Ptcd1Q8C2E4 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC32.24■■■□□ 2.75
Ptcd1Q8C2E4 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC32.22■■■□□ 2.75
Ptcd1Q8C2E4 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC32.22■■■□□ 2.75
Ptcd1Q8C2E4 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC32.2■■■□□ 2.75
Ptcd1Q8C2E4 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC32.19■■■□□ 2.74
Ptcd1Q8C2E4 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC32.18■■■□□ 2.74
Ptcd1Q8C2E4 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC32.14■■■□□ 2.74
Ptcd1Q8C2E4 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC32.13■■■□□ 2.73
Ptcd1Q8C2E4 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC32.13■■■□□ 2.73
Ptcd1Q8C2E4 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC32.12■■■□□ 2.73
Ptcd1Q8C2E4 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC32.09■■■□□ 2.73
Ptcd1Q8C2E4 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC32.08■■■□□ 2.73
Ptcd1Q8C2E4 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC32.07■■■□□ 2.72
Ptcd1Q8C2E4 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC32.06■■■□□ 2.72
Ptcd1Q8C2E4 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC32.05■■■□□ 2.72
Ptcd1Q8C2E4 Gm24970-201ENSMUST00000175582 82 ntBASIC32.05■■■□□ 2.72
Ptcd1Q8C2E4 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC32.04■■■□□ 2.72
Ptcd1Q8C2E4 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC32■■■□□ 2.71
Ptcd1Q8C2E4 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC31.98■■■□□ 2.71
Ptcd1Q8C2E4 Gm9939-201ENSMUST00000067161 1154 ntBASIC31.98■■■□□ 2.71
Ptcd1Q8C2E4 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC31.92■■■□□ 2.7
Ptcd1Q8C2E4 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC31.9■■■□□ 2.7
Ptcd1Q8C2E4 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC31.9■■■□□ 2.7
Retrieved 100 of 76,532 protein–RNA pairs in 72.7 ms