Protein–RNA interactions for Protein: Q8C1Q6

Smim4, Small integral membrane protein 4, mousemouse

Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smim4Q8C1Q6 AC153504.1-201ENSMUST00000218379 2290 ntBASIC21.64■■□□□ 1.05
Smim4Q8C1Q6 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC21.64■■□□□ 1.05
Smim4Q8C1Q6 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Smim4Q8C1Q6 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Smim4Q8C1Q6 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Smim4Q8C1Q6 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC21.61■■□□□ 1.05
Smim4Q8C1Q6 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC21.6■■□□□ 1.05
Smim4Q8C1Q6 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Smim4Q8C1Q6 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
Smim4Q8C1Q6 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Smim4Q8C1Q6 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.05
Smim4Q8C1Q6 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.05
Smim4Q8C1Q6 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC21.57■■□□□ 1.04
Smim4Q8C1Q6 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Smim4Q8C1Q6 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC21.57■■□□□ 1.04
Smim4Q8C1Q6 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Smim4Q8C1Q6 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
Smim4Q8C1Q6 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Smim4Q8C1Q6 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
Smim4Q8C1Q6 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
Smim4Q8C1Q6 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
Smim4Q8C1Q6 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Smim4Q8C1Q6 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC21.49■■□□□ 1.03
Smim4Q8C1Q6 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Smim4Q8C1Q6 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC21.49■■□□□ 1.03
Smim4Q8C1Q6 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC21.49■■□□□ 1.03
Smim4Q8C1Q6 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC21.48■■□□□ 1.03
Smim4Q8C1Q6 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC21.46■■□□□ 1.03
Smim4Q8C1Q6 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC21.46■■□□□ 1.03
Smim4Q8C1Q6 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Smim4Q8C1Q6 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC21.45■■□□□ 1.02
Smim4Q8C1Q6 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Smim4Q8C1Q6 Gm27322-201ENSMUST00000184007 104 ntBASIC21.44■■□□□ 1.02
Smim4Q8C1Q6 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Smim4Q8C1Q6 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC21.43■■□□□ 1.02
Smim4Q8C1Q6 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC21.43■■□□□ 1.02
Smim4Q8C1Q6 Gm17082-201ENSMUST00000166043 1091 ntBASIC21.42■■□□□ 1.02
Smim4Q8C1Q6 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC21.41■■□□□ 1.02
Smim4Q8C1Q6 AC166822.3-201ENSMUST00000227394 661 ntBASIC21.41■■□□□ 1.02
Smim4Q8C1Q6 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC21.41■■□□□ 1.02
Smim4Q8C1Q6 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC21.4■■□□□ 1.02
Smim4Q8C1Q6 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Smim4Q8C1Q6 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Smim4Q8C1Q6 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Smim4Q8C1Q6 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC21.37■■□□□ 1.01
Smim4Q8C1Q6 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC21.37■■□□□ 1.01
Smim4Q8C1Q6 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Smim4Q8C1Q6 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC21.36■■□□□ 1.01
Smim4Q8C1Q6 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC21.35■■□□□ 1.01
Smim4Q8C1Q6 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC21.35■■□□□ 1.01
Smim4Q8C1Q6 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC21.35■■□□□ 1.01
Smim4Q8C1Q6 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC21.33■■□□□ 1.01
Smim4Q8C1Q6 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC21.33■■□□□ 1
Smim4Q8C1Q6 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Smim4Q8C1Q6 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC21.31■■□□□ 1
Smim4Q8C1Q6 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Smim4Q8C1Q6 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Smim4Q8C1Q6 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Smim4Q8C1Q6 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Smim4Q8C1Q6 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Smim4Q8C1Q6 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Smim4Q8C1Q6 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC21.28■■□□□ 1
Smim4Q8C1Q6 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC21.27■□□□□ 0.99
Smim4Q8C1Q6 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Smim4Q8C1Q6 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
Smim4Q8C1Q6 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Smim4Q8C1Q6 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Smim4Q8C1Q6 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Smim4Q8C1Q6 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Smim4Q8C1Q6 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Smim4Q8C1Q6 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Smim4Q8C1Q6 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Smim4Q8C1Q6 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Smim4Q8C1Q6 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.99
Smim4Q8C1Q6 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Smim4Q8C1Q6 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Smim4Q8C1Q6 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
Smim4Q8C1Q6 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Smim4Q8C1Q6 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
Smim4Q8C1Q6 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Smim4Q8C1Q6 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Smim4Q8C1Q6 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Smim4Q8C1Q6 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Smim4Q8C1Q6 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
Smim4Q8C1Q6 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Smim4Q8C1Q6 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Smim4Q8C1Q6 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Smim4Q8C1Q6 Gm9905-201ENSMUST00000065740 1845 ntBASIC21.11■□□□□ 0.97
Smim4Q8C1Q6 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Smim4Q8C1Q6 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Smim4Q8C1Q6 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Smim4Q8C1Q6 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Smim4Q8C1Q6 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC21.1■□□□□ 0.97
Smim4Q8C1Q6 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Smim4Q8C1Q6 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
Smim4Q8C1Q6 Zxda-201ENSMUST00000117281 2621 ntBASIC21.09■□□□□ 0.97
Smim4Q8C1Q6 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Smim4Q8C1Q6 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Smim4Q8C1Q6 Gm26115-201ENSMUST00000175605 87 ntBASIC21.07■□□□□ 0.96
Smim4Q8C1Q6 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Retrieved 100 of 76,532 protein–RNA pairs in 43.1 ms