Protein–RNA interactions for Protein: Q8BSI6

R3hcc1, R3H and coiled-coil domain-containing protein 1, mousemouse

Predictions only

Length 488 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
R3hcc1Q8BSI6 Gm25262-201ENSMUST00000174934 133 ntBASIC30.2■■■□□ 2.43
R3hcc1Q8BSI6 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC30.17■■■□□ 2.42
R3hcc1Q8BSI6 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC30.16■■■□□ 2.42
R3hcc1Q8BSI6 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC30.16■■■□□ 2.42
R3hcc1Q8BSI6 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC30.13■■■□□ 2.41
R3hcc1Q8BSI6 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC30.12■■■□□ 2.41
R3hcc1Q8BSI6 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC30.12■■■□□ 2.41
R3hcc1Q8BSI6 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC30.1■■■□□ 2.41
R3hcc1Q8BSI6 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC30.1■■■□□ 2.41
R3hcc1Q8BSI6 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC30.08■■■□□ 2.41
R3hcc1Q8BSI6 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC30.08■■■□□ 2.41
R3hcc1Q8BSI6 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC30.08■■■□□ 2.41
R3hcc1Q8BSI6 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC30.08■■■□□ 2.41
R3hcc1Q8BSI6 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC30.06■■■□□ 2.4
R3hcc1Q8BSI6 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC30.03■■■□□ 2.4
R3hcc1Q8BSI6 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC30.02■■■□□ 2.4
R3hcc1Q8BSI6 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC30.01■■■□□ 2.39
R3hcc1Q8BSI6 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC30■■■□□ 2.39
R3hcc1Q8BSI6 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC30■■■□□ 2.39
R3hcc1Q8BSI6 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC29.97■■■□□ 2.39
R3hcc1Q8BSI6 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC29.96■■■□□ 2.39
R3hcc1Q8BSI6 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC29.94■■■□□ 2.38
R3hcc1Q8BSI6 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC29.93■■■□□ 2.38
R3hcc1Q8BSI6 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC29.91■■■□□ 2.38
R3hcc1Q8BSI6 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC29.91■■■□□ 2.38
R3hcc1Q8BSI6 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC29.88■■■□□ 2.37
R3hcc1Q8BSI6 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC29.87■■■□□ 2.37
R3hcc1Q8BSI6 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC29.87■■■□□ 2.37
R3hcc1Q8BSI6 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC29.86■■■□□ 2.37
R3hcc1Q8BSI6 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC29.86■■■□□ 2.37
R3hcc1Q8BSI6 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC29.82■■■□□ 2.36
R3hcc1Q8BSI6 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC29.82■■■□□ 2.36
R3hcc1Q8BSI6 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC29.81■■■□□ 2.36
R3hcc1Q8BSI6 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC29.81■■■□□ 2.36
R3hcc1Q8BSI6 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC29.8■■■□□ 2.36
R3hcc1Q8BSI6 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC29.79■■■□□ 2.36
R3hcc1Q8BSI6 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC29.79■■■□□ 2.36
R3hcc1Q8BSI6 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC29.79■■■□□ 2.36
R3hcc1Q8BSI6 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC29.79■■■□□ 2.36
R3hcc1Q8BSI6 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC29.79■■■□□ 2.36
R3hcc1Q8BSI6 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC29.78■■■□□ 2.36
R3hcc1Q8BSI6 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC29.78■■■□□ 2.36
R3hcc1Q8BSI6 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC29.75■■■□□ 2.35
R3hcc1Q8BSI6 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC29.74■■■□□ 2.35
R3hcc1Q8BSI6 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC29.73■■■□□ 2.35
R3hcc1Q8BSI6 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC29.72■■■□□ 2.35
R3hcc1Q8BSI6 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC29.72■■■□□ 2.35
R3hcc1Q8BSI6 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC29.71■■■□□ 2.35
R3hcc1Q8BSI6 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC29.71■■■□□ 2.35
R3hcc1Q8BSI6 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC29.7■■■□□ 2.35
R3hcc1Q8BSI6 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC29.69■■■□□ 2.34
R3hcc1Q8BSI6 AC166822.3-201ENSMUST00000227394 661 ntBASIC29.69■■■□□ 2.34
R3hcc1Q8BSI6 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC29.68■■■□□ 2.34
R3hcc1Q8BSI6 Gm17082-201ENSMUST00000166043 1091 ntBASIC29.67■■■□□ 2.34
R3hcc1Q8BSI6 Gm27322-201ENSMUST00000184007 104 ntBASIC29.65■■■□□ 2.34
R3hcc1Q8BSI6 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC29.64■■■□□ 2.34
R3hcc1Q8BSI6 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC29.64■■■□□ 2.34
R3hcc1Q8BSI6 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC29.64■■■□□ 2.34
R3hcc1Q8BSI6 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC29.64■■■□□ 2.34
R3hcc1Q8BSI6 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC29.64■■■□□ 2.33
R3hcc1Q8BSI6 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC29.63■■■□□ 2.33
R3hcc1Q8BSI6 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC29.62■■■□□ 2.33
R3hcc1Q8BSI6 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC29.61■■■□□ 2.33
R3hcc1Q8BSI6 Gm9905-201ENSMUST00000065740 1845 ntBASIC29.61■■■□□ 2.33
R3hcc1Q8BSI6 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC29.59■■■□□ 2.33
R3hcc1Q8BSI6 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC29.57■■■□□ 2.32
R3hcc1Q8BSI6 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC29.57■■■□□ 2.32
R3hcc1Q8BSI6 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC29.57■■■□□ 2.32
R3hcc1Q8BSI6 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC29.56■■■□□ 2.32
R3hcc1Q8BSI6 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC29.53■■■□□ 2.32
R3hcc1Q8BSI6 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC29.53■■■□□ 2.32
R3hcc1Q8BSI6 Zxda-201ENSMUST00000117281 2621 ntBASIC29.53■■■□□ 2.32
R3hcc1Q8BSI6 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC29.53■■■□□ 2.32
R3hcc1Q8BSI6 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC29.53■■■□□ 2.32
R3hcc1Q8BSI6 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC29.52■■■□□ 2.32
R3hcc1Q8BSI6 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC29.5■■■□□ 2.31
R3hcc1Q8BSI6 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC29.49■■■□□ 2.31
R3hcc1Q8BSI6 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC29.47■■■□□ 2.31
R3hcc1Q8BSI6 Gm6206-201ENSMUST00000133472 2199 ntBASIC29.47■■■□□ 2.31
R3hcc1Q8BSI6 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC29.46■■■□□ 2.31
R3hcc1Q8BSI6 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC29.46■■■□□ 2.31
R3hcc1Q8BSI6 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC29.44■■■□□ 2.3
R3hcc1Q8BSI6 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC29.43■■■□□ 2.3
R3hcc1Q8BSI6 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC29.42■■■□□ 2.3
R3hcc1Q8BSI6 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC29.41■■■□□ 2.3
R3hcc1Q8BSI6 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC29.41■■■□□ 2.3
R3hcc1Q8BSI6 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC29.4■■■□□ 2.3
R3hcc1Q8BSI6 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC29.4■■■□□ 2.3
R3hcc1Q8BSI6 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC29.4■■■□□ 2.3
R3hcc1Q8BSI6 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC29.39■■■□□ 2.3
R3hcc1Q8BSI6 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC29.39■■■□□ 2.3
R3hcc1Q8BSI6 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC29.36■■■□□ 2.29
R3hcc1Q8BSI6 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC29.35■■■□□ 2.29
R3hcc1Q8BSI6 Gm43445-201ENSMUST00000198564 2091 ntBASIC29.35■■■□□ 2.29
R3hcc1Q8BSI6 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC29.32■■■□□ 2.28
R3hcc1Q8BSI6 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC29.31■■■□□ 2.28
R3hcc1Q8BSI6 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC29.31■■■□□ 2.28
R3hcc1Q8BSI6 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC29.3■■■□□ 2.28
R3hcc1Q8BSI6 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC29.29■■■□□ 2.28
R3hcc1Q8BSI6 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC29.29■■■□□ 2.28
Retrieved 100 of 76,532 protein–RNA pairs in 32.7 ms