Protein–RNA interactions for Protein: Q8BJ37

Tdp1, Tyrosyl-DNA phosphodiesterase 1, mousemouse

Predictions only

Length 609 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tdp1Q8BJ37 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC29.83■■■□□ 2.37
Tdp1Q8BJ37 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC29.83■■■□□ 2.37
Tdp1Q8BJ37 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC29.82■■■□□ 2.37
Tdp1Q8BJ37 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC29.82■■■□□ 2.36
Tdp1Q8BJ37 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC29.79■■■□□ 2.36
Tdp1Q8BJ37 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC29.77■■■□□ 2.36
Tdp1Q8BJ37 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC29.76■■■□□ 2.35
Tdp1Q8BJ37 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC29.73■■■□□ 2.35
Tdp1Q8BJ37 Tdp2-203ENSMUST00000223804 1136 ntBASIC29.73■■■□□ 2.35
Tdp1Q8BJ37 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC29.73■■■□□ 2.35
Tdp1Q8BJ37 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC29.71■■■□□ 2.35
Tdp1Q8BJ37 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC29.71■■■□□ 2.35
Tdp1Q8BJ37 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC29.7■■■□□ 2.35
Tdp1Q8BJ37 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC29.7■■■□□ 2.35
Tdp1Q8BJ37 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC29.69■■■□□ 2.34
Tdp1Q8BJ37 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC29.68■■■□□ 2.34
Tdp1Q8BJ37 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC29.67■■■□□ 2.34
Tdp1Q8BJ37 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC29.66■■■□□ 2.34
Tdp1Q8BJ37 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC29.62■■■□□ 2.33
Tdp1Q8BJ37 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC29.61■■■□□ 2.33
Tdp1Q8BJ37 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC29.59■■■□□ 2.33
Tdp1Q8BJ37 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC29.59■■■□□ 2.33
Tdp1Q8BJ37 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC29.58■■■□□ 2.33
Tdp1Q8BJ37 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC29.56■■■□□ 2.32
Tdp1Q8BJ37 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC29.55■■■□□ 2.32
Tdp1Q8BJ37 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC29.54■■■□□ 2.32
Tdp1Q8BJ37 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC29.54■■■□□ 2.32
Tdp1Q8BJ37 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC29.53■■■□□ 2.32
Tdp1Q8BJ37 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC29.52■■■□□ 2.32
Tdp1Q8BJ37 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC29.52■■■□□ 2.32
Tdp1Q8BJ37 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC29.51■■■□□ 2.32
Tdp1Q8BJ37 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC29.51■■■□□ 2.31
Tdp1Q8BJ37 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC29.5■■■□□ 2.31
Tdp1Q8BJ37 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC29.48■■■□□ 2.31
Tdp1Q8BJ37 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC29.46■■■□□ 2.31
Tdp1Q8BJ37 Gm45855-201ENSMUST00000212546 880 ntBASIC29.43■■■□□ 2.3
Tdp1Q8BJ37 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC29.4■■■□□ 2.3
Tdp1Q8BJ37 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC29.39■■■□□ 2.3
Tdp1Q8BJ37 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC29.38■■■□□ 2.29
Tdp1Q8BJ37 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC29.36■■■□□ 2.29
Tdp1Q8BJ37 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC29.36■■■□□ 2.29
Tdp1Q8BJ37 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC29.35■■■□□ 2.29
Tdp1Q8BJ37 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC29.32■■■□□ 2.28
Tdp1Q8BJ37 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC29.32■■■□□ 2.28
Tdp1Q8BJ37 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC29.31■■■□□ 2.28
Tdp1Q8BJ37 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC29.31■■■□□ 2.28
Tdp1Q8BJ37 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC29.31■■■□□ 2.28
Tdp1Q8BJ37 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC29.29■■■□□ 2.28
Tdp1Q8BJ37 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC29.27■■■□□ 2.28
Tdp1Q8BJ37 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC29.26■■■□□ 2.28
Tdp1Q8BJ37 Gm9397-201ENSMUST00000200125 605 ntBASIC29.26■■■□□ 2.27
Tdp1Q8BJ37 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC29.25■■■□□ 2.27
Tdp1Q8BJ37 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC29.24■■■□□ 2.27
Tdp1Q8BJ37 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC29.23■■■□□ 2.27
Tdp1Q8BJ37 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC29.23■■■□□ 2.27
Tdp1Q8BJ37 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC29.21■■■□□ 2.27
Tdp1Q8BJ37 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC29.2■■■□□ 2.27
Tdp1Q8BJ37 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC29.2■■■□□ 2.26
Tdp1Q8BJ37 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC29.18■■■□□ 2.26
Tdp1Q8BJ37 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC29.17■■■□□ 2.26
Tdp1Q8BJ37 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC29.16■■■□□ 2.26
Tdp1Q8BJ37 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC29.16■■■□□ 2.26
Tdp1Q8BJ37 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC29.15■■■□□ 2.26
Tdp1Q8BJ37 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC29.14■■■□□ 2.25
Tdp1Q8BJ37 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC29.13■■■□□ 2.25
Tdp1Q8BJ37 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC29.12■■■□□ 2.25
Tdp1Q8BJ37 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC29.12■■■□□ 2.25
Tdp1Q8BJ37 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC29.12■■■□□ 2.25
Tdp1Q8BJ37 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC29.12■■■□□ 2.25
Tdp1Q8BJ37 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC29.09■■■□□ 2.25
Tdp1Q8BJ37 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC29.08■■■□□ 2.25
Tdp1Q8BJ37 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC29.07■■■□□ 2.24
Tdp1Q8BJ37 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC29.07■■■□□ 2.24
Tdp1Q8BJ37 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC29.06■■■□□ 2.24
Tdp1Q8BJ37 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC29.05■■■□□ 2.24
Tdp1Q8BJ37 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC29.04■■■□□ 2.24
Tdp1Q8BJ37 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC29.04■■■□□ 2.24
Tdp1Q8BJ37 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC29.04■■■□□ 2.24
Tdp1Q8BJ37 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC29.04■■■□□ 2.24
Tdp1Q8BJ37 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC29.04■■■□□ 2.24
Tdp1Q8BJ37 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC29.03■■■□□ 2.24
Tdp1Q8BJ37 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC29.03■■■□□ 2.24
Tdp1Q8BJ37 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC29.02■■■□□ 2.24
Tdp1Q8BJ37 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC29■■■□□ 2.23
Tdp1Q8BJ37 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC28.99■■■□□ 2.23
Tdp1Q8BJ37 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC28.99■■■□□ 2.23
Tdp1Q8BJ37 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC28.99■■■□□ 2.23
Tdp1Q8BJ37 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC28.97■■■□□ 2.23
Tdp1Q8BJ37 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC28.97■■■□□ 2.23
Tdp1Q8BJ37 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC28.96■■■□□ 2.23
Tdp1Q8BJ37 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC28.96■■■□□ 2.23
Tdp1Q8BJ37 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC28.95■■■□□ 2.23
Tdp1Q8BJ37 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC28.93■■■□□ 2.22
Tdp1Q8BJ37 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC28.91■■■□□ 2.22
Tdp1Q8BJ37 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC28.91■■■□□ 2.22
Tdp1Q8BJ37 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC28.9■■■□□ 2.22
Tdp1Q8BJ37 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC28.9■■■□□ 2.22
Tdp1Q8BJ37 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC28.88■■■□□ 2.21
Tdp1Q8BJ37 Gm24970-201ENSMUST00000175582 82 ntBASIC28.88■■■□□ 2.21
Tdp1Q8BJ37 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC28.88■■■□□ 2.21
Retrieved 100 of 76,532 protein–RNA pairs in 36.8 ms