Protein–RNA interactions for Protein: Q8BGH2

Samm50, Sorting and assembly machinery component 50 homolog, mousemouse

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Samm50Q8BGH2 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC30.43■■■□□ 2.46
Samm50Q8BGH2 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC30.43■■■□□ 2.46
Samm50Q8BGH2 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC30.39■■■□□ 2.46
Samm50Q8BGH2 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC30.38■■■□□ 2.45
Samm50Q8BGH2 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC30.37■■■□□ 2.45
Samm50Q8BGH2 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC30.36■■■□□ 2.45
Samm50Q8BGH2 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC30.34■■■□□ 2.45
Samm50Q8BGH2 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC30.34■■■□□ 2.45
Samm50Q8BGH2 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC30.29■■■□□ 2.44
Samm50Q8BGH2 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC30.29■■■□□ 2.44
Samm50Q8BGH2 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC30.28■■■□□ 2.44
Samm50Q8BGH2 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC30.26■■■□□ 2.44
Samm50Q8BGH2 AC166822.3-201ENSMUST00000227394 661 ntBASIC30.25■■■□□ 2.43
Samm50Q8BGH2 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC30.23■■■□□ 2.43
Samm50Q8BGH2 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC30.22■■■□□ 2.43
Samm50Q8BGH2 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC30.22■■■□□ 2.43
Samm50Q8BGH2 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC30.22■■■□□ 2.43
Samm50Q8BGH2 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC30.19■■■□□ 2.42
Samm50Q8BGH2 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC30.18■■■□□ 2.42
Samm50Q8BGH2 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC30.17■■■□□ 2.42
Samm50Q8BGH2 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC30.17■■■□□ 2.42
Samm50Q8BGH2 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC30.15■■■□□ 2.42
Samm50Q8BGH2 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC30.14■■■□□ 2.42
Samm50Q8BGH2 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC30.14■■■□□ 2.42
Samm50Q8BGH2 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC30.13■■■□□ 2.41
Samm50Q8BGH2 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC30.11■■■□□ 2.41
Samm50Q8BGH2 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC30.1■■■□□ 2.41
Samm50Q8BGH2 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC30.09■■■□□ 2.41
Samm50Q8BGH2 Gm24804-201ENSMUST00000174982 85 ntBASIC30.08■■■□□ 2.41
Samm50Q8BGH2 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC30.07■■■□□ 2.4
Samm50Q8BGH2 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC30.05■■■□□ 2.4
Samm50Q8BGH2 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC30.05■■■□□ 2.4
Samm50Q8BGH2 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC30.04■■■□□ 2.4
Samm50Q8BGH2 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC30.04■■■□□ 2.4
Samm50Q8BGH2 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC30.02■■■□□ 2.4
Samm50Q8BGH2 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC30■■■□□ 2.39
Samm50Q8BGH2 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC29.98■■■□□ 2.39
Samm50Q8BGH2 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC29.97■■■□□ 2.39
Samm50Q8BGH2 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC29.96■■■□□ 2.39
Samm50Q8BGH2 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC29.95■■■□□ 2.39
Samm50Q8BGH2 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC29.95■■■□□ 2.39
Samm50Q8BGH2 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC29.94■■■□□ 2.38
Samm50Q8BGH2 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC29.93■■■□□ 2.38
Samm50Q8BGH2 Mipep-204ENSMUST00000225043 1548 ntBASIC29.93■■■□□ 2.38
Samm50Q8BGH2 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC29.91■■■□□ 2.38
Samm50Q8BGH2 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC29.86■■■□□ 2.37
Samm50Q8BGH2 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC29.86■■■□□ 2.37
Samm50Q8BGH2 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC29.85■■■□□ 2.37
Samm50Q8BGH2 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC29.85■■■□□ 2.37
Samm50Q8BGH2 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC29.84■■■□□ 2.37
Samm50Q8BGH2 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC29.84■■■□□ 2.37
Samm50Q8BGH2 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC29.84■■■□□ 2.37
Samm50Q8BGH2 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC29.83■■■□□ 2.37
Samm50Q8BGH2 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC29.82■■■□□ 2.36
Samm50Q8BGH2 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC29.81■■■□□ 2.36
Samm50Q8BGH2 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC29.81■■■□□ 2.36
Samm50Q8BGH2 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC29.8■■■□□ 2.36
Samm50Q8BGH2 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC29.8■■■□□ 2.36
Samm50Q8BGH2 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC29.8■■■□□ 2.36
Samm50Q8BGH2 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC29.8■■■□□ 2.36
Samm50Q8BGH2 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC29.78■■■□□ 2.36
Samm50Q8BGH2 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC29.78■■■□□ 2.36
Samm50Q8BGH2 Gm6206-201ENSMUST00000133472 2199 ntBASIC29.77■■■□□ 2.36
Samm50Q8BGH2 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC29.77■■■□□ 2.36
Samm50Q8BGH2 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC29.77■■■□□ 2.36
Samm50Q8BGH2 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC29.76■■■□□ 2.35
Samm50Q8BGH2 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC29.76■■■□□ 2.35
Samm50Q8BGH2 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC29.74■■■□□ 2.35
Samm50Q8BGH2 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC29.73■■■□□ 2.35
Samm50Q8BGH2 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC29.72■■■□□ 2.35
Samm50Q8BGH2 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC29.72■■■□□ 2.35
Samm50Q8BGH2 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC29.71■■■□□ 2.35
Samm50Q8BGH2 Gm9905-201ENSMUST00000065740 1845 ntBASIC29.68■■■□□ 2.34
Samm50Q8BGH2 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC29.67■■■□□ 2.34
Samm50Q8BGH2 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC29.67■■■□□ 2.34
Samm50Q8BGH2 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC29.66■■■□□ 2.34
Samm50Q8BGH2 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC29.64■■■□□ 2.34
Samm50Q8BGH2 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC29.62■■■□□ 2.33
Samm50Q8BGH2 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC29.61■■■□□ 2.33
Samm50Q8BGH2 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC29.6■■■□□ 2.33
Samm50Q8BGH2 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC29.6■■■□□ 2.33
Samm50Q8BGH2 Zxda-201ENSMUST00000117281 2621 ntBASIC29.6■■■□□ 2.33
Samm50Q8BGH2 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC29.59■■■□□ 2.33
Samm50Q8BGH2 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC29.59■■■□□ 2.33
Samm50Q8BGH2 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC29.59■■■□□ 2.33
Samm50Q8BGH2 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC29.58■■■□□ 2.33
Samm50Q8BGH2 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC29.58■■■□□ 2.33
Samm50Q8BGH2 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC29.57■■■□□ 2.32
Samm50Q8BGH2 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC29.56■■■□□ 2.32
Samm50Q8BGH2 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC29.56■■■□□ 2.32
Samm50Q8BGH2 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC29.55■■■□□ 2.32
Samm50Q8BGH2 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC29.54■■■□□ 2.32
Samm50Q8BGH2 Peli2-204ENSMUST00000226513 1320 ntBASIC29.53■■■□□ 2.32
Samm50Q8BGH2 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC29.53■■■□□ 2.32
Samm50Q8BGH2 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC29.52■■■□□ 2.32
Samm50Q8BGH2 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC29.52■■■□□ 2.32
Samm50Q8BGH2 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC29.51■■■□□ 2.31
Samm50Q8BGH2 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC29.5■■■□□ 2.31
Samm50Q8BGH2 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC29.48■■■□□ 2.31
Samm50Q8BGH2 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC29.47■■■□□ 2.31
Retrieved 100 of 76,532 protein–RNA pairs in 14.4 ms