Protein–RNA interactions for Protein: Q80X41

Vrk1, Serine/threonine-protein kinase VRK1, mousemouse

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vrk1Q80X41 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
Vrk1Q80X41 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC25.3■■□□□ 1.64
Vrk1Q80X41 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
Vrk1Q80X41 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC25.28■■□□□ 1.64
Vrk1Q80X41 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC25.26■■□□□ 1.63
Vrk1Q80X41 Tdp2-203ENSMUST00000223804 1136 ntBASIC25.26■■□□□ 1.63
Vrk1Q80X41 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC25.24■■□□□ 1.63
Vrk1Q80X41 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
Vrk1Q80X41 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
Vrk1Q80X41 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC25.21■■□□□ 1.63
Vrk1Q80X41 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC25.21■■□□□ 1.63
Vrk1Q80X41 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC25.2■■□□□ 1.62
Vrk1Q80X41 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC25.19■■□□□ 1.62
Vrk1Q80X41 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC25.19■■□□□ 1.62
Vrk1Q80X41 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
Vrk1Q80X41 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
Vrk1Q80X41 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
Vrk1Q80X41 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
Vrk1Q80X41 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC25.16■■□□□ 1.62
Vrk1Q80X41 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
Vrk1Q80X41 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC25.16■■□□□ 1.62
Vrk1Q80X41 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC25.14■■□□□ 1.61
Vrk1Q80X41 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
Vrk1Q80X41 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
Vrk1Q80X41 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
Vrk1Q80X41 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC25.07■■□□□ 1.6
Vrk1Q80X41 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC25.07■■□□□ 1.6
Vrk1Q80X41 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC25.06■■□□□ 1.6
Vrk1Q80X41 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
Vrk1Q80X41 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC25.05■■□□□ 1.6
Vrk1Q80X41 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
Vrk1Q80X41 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
Vrk1Q80X41 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC24.98■■□□□ 1.59
Vrk1Q80X41 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
Vrk1Q80X41 Gm45855-201ENSMUST00000212546 880 ntBASIC24.97■■□□□ 1.59
Vrk1Q80X41 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC24.96■■□□□ 1.59
Vrk1Q80X41 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC24.95■■□□□ 1.58
Vrk1Q80X41 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC24.94■■□□□ 1.58
Vrk1Q80X41 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC24.93■■□□□ 1.58
Vrk1Q80X41 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC24.93■■□□□ 1.58
Vrk1Q80X41 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
Vrk1Q80X41 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC24.92■■□□□ 1.58
Vrk1Q80X41 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.57
Vrk1Q80X41 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
Vrk1Q80X41 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC24.88■■□□□ 1.57
Vrk1Q80X41 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC24.88■■□□□ 1.57
Vrk1Q80X41 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
Vrk1Q80X41 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC24.87■■□□□ 1.57
Vrk1Q80X41 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC24.85■■□□□ 1.57
Vrk1Q80X41 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC24.85■■□□□ 1.57
Vrk1Q80X41 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
Vrk1Q80X41 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
Vrk1Q80X41 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC24.8■■□□□ 1.56
Vrk1Q80X41 Gm9397-201ENSMUST00000200125 605 ntBASIC24.8■■□□□ 1.56
Vrk1Q80X41 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
Vrk1Q80X41 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC24.79■■□□□ 1.56
Vrk1Q80X41 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
Vrk1Q80X41 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
Vrk1Q80X41 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
Vrk1Q80X41 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
Vrk1Q80X41 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC24.74■■□□□ 1.55
Vrk1Q80X41 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC24.72■■□□□ 1.55
Vrk1Q80X41 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC24.71■■□□□ 1.55
Vrk1Q80X41 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC24.71■■□□□ 1.55
Vrk1Q80X41 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC24.71■■□□□ 1.55
Vrk1Q80X41 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
Vrk1Q80X41 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC24.71■■□□□ 1.55
Vrk1Q80X41 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC24.7■■□□□ 1.54
Vrk1Q80X41 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
Vrk1Q80X41 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
Vrk1Q80X41 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
Vrk1Q80X41 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
Vrk1Q80X41 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC24.66■■□□□ 1.54
Vrk1Q80X41 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC24.66■■□□□ 1.54
Vrk1Q80X41 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC24.64■■□□□ 1.54
Vrk1Q80X41 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC24.64■■□□□ 1.54
Vrk1Q80X41 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC24.63■■□□□ 1.53
Vrk1Q80X41 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
Vrk1Q80X41 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC24.63■■□□□ 1.53
Vrk1Q80X41 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC24.62■■□□□ 1.53
Vrk1Q80X41 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
Vrk1Q80X41 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
Vrk1Q80X41 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
Vrk1Q80X41 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
Vrk1Q80X41 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC24.6■■□□□ 1.53
Vrk1Q80X41 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
Vrk1Q80X41 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC24.58■■□□□ 1.53
Vrk1Q80X41 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC24.58■■□□□ 1.52
Vrk1Q80X41 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC24.57■■□□□ 1.52
Vrk1Q80X41 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC24.57■■□□□ 1.52
Vrk1Q80X41 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC24.56■■□□□ 1.52
Vrk1Q80X41 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
Vrk1Q80X41 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC24.53■■□□□ 1.52
Vrk1Q80X41 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC24.53■■□□□ 1.52
Vrk1Q80X41 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
Vrk1Q80X41 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
Vrk1Q80X41 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC24.5■■□□□ 1.51
Vrk1Q80X41 Gm24970-201ENSMUST00000175582 82 ntBASIC24.5■■□□□ 1.51
Vrk1Q80X41 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
Vrk1Q80X41 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
Retrieved 100 of 76,532 protein–RNA pairs in 423.8 ms