Protein–RNA interactions for Protein: Q7M6Y2

Sox11, Transcription factor SOX-11, mousemouse

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox11Q7M6Y2 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC26.92■■□□□ 1.9
Sox11Q7M6Y2 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC26.92■■□□□ 1.9
Sox11Q7M6Y2 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC26.91■■□□□ 1.9
Sox11Q7M6Y2 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC26.9■■□□□ 1.9
Sox11Q7M6Y2 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC26.9■■□□□ 1.9
Sox11Q7M6Y2 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC26.9■■□□□ 1.9
Sox11Q7M6Y2 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC26.9■■□□□ 1.9
Sox11Q7M6Y2 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.9
Sox11Q7M6Y2 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC26.88■■□□□ 1.89
Sox11Q7M6Y2 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC26.86■■□□□ 1.89
Sox11Q7M6Y2 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
Sox11Q7M6Y2 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC26.84■■□□□ 1.89
Sox11Q7M6Y2 Zfp131-207ENSMUST00000224946 1783 ntBASIC26.81■■□□□ 1.88
Sox11Q7M6Y2 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
Sox11Q7M6Y2 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC26.77■■□□□ 1.88
Sox11Q7M6Y2 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
Sox11Q7M6Y2 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
Sox11Q7M6Y2 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC26.74■■□□□ 1.87
Sox11Q7M6Y2 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC26.74■■□□□ 1.87
Sox11Q7M6Y2 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC26.73■■□□□ 1.87
Sox11Q7M6Y2 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC26.73■■□□□ 1.87
Sox11Q7M6Y2 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC26.73■■□□□ 1.87
Sox11Q7M6Y2 Gm45855-201ENSMUST00000212546 880 ntBASIC26.72■■□□□ 1.87
Sox11Q7M6Y2 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC26.68■■□□□ 1.86
Sox11Q7M6Y2 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC26.68■■□□□ 1.86
Sox11Q7M6Y2 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
Sox11Q7M6Y2 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC26.57■■□□□ 1.84
Sox11Q7M6Y2 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
Sox11Q7M6Y2 Gm9397-201ENSMUST00000200125 605 ntBASIC26.55■■□□□ 1.84
Sox11Q7M6Y2 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC26.55■■□□□ 1.84
Sox11Q7M6Y2 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC26.54■■□□□ 1.84
Sox11Q7M6Y2 Mipep-204ENSMUST00000225043 1548 ntBASIC26.54■■□□□ 1.84
Sox11Q7M6Y2 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC26.53■■□□□ 1.84
Sox11Q7M6Y2 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
Sox11Q7M6Y2 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
Sox11Q7M6Y2 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC26.51■■□□□ 1.83
Sox11Q7M6Y2 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC26.49■■□□□ 1.83
Sox11Q7M6Y2 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC26.49■■□□□ 1.83
Sox11Q7M6Y2 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
Sox11Q7M6Y2 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC26.48■■□□□ 1.83
Sox11Q7M6Y2 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC26.47■■□□□ 1.83
Sox11Q7M6Y2 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
Sox11Q7M6Y2 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC26.46■■□□□ 1.83
Sox11Q7M6Y2 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.83
Sox11Q7M6Y2 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
Sox11Q7M6Y2 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
Sox11Q7M6Y2 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC26.44■■□□□ 1.82
Sox11Q7M6Y2 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
Sox11Q7M6Y2 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
Sox11Q7M6Y2 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC26.42■■□□□ 1.82
Sox11Q7M6Y2 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
Sox11Q7M6Y2 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC26.41■■□□□ 1.82
Sox11Q7M6Y2 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC26.41■■□□□ 1.82
Sox11Q7M6Y2 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC26.4■■□□□ 1.82
Sox11Q7M6Y2 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.81
Sox11Q7M6Y2 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC26.38■■□□□ 1.81
Sox11Q7M6Y2 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
Sox11Q7M6Y2 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC26.36■■□□□ 1.81
Sox11Q7M6Y2 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
Sox11Q7M6Y2 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC26.35■■□□□ 1.81
Sox11Q7M6Y2 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC26.35■■□□□ 1.81
Sox11Q7M6Y2 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC26.35■■□□□ 1.81
Sox11Q7M6Y2 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC26.34■■□□□ 1.81
Sox11Q7M6Y2 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC26.34■■□□□ 1.81
Sox11Q7M6Y2 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
Sox11Q7M6Y2 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC26.31■■□□□ 1.8
Sox11Q7M6Y2 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC26.31■■□□□ 1.8
Sox11Q7M6Y2 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
Sox11Q7M6Y2 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC26.31■■□□□ 1.8
Sox11Q7M6Y2 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
Sox11Q7M6Y2 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
Sox11Q7M6Y2 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC26.28■■□□□ 1.8
Sox11Q7M6Y2 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
Sox11Q7M6Y2 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
Sox11Q7M6Y2 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC26.21■■□□□ 1.79
Sox11Q7M6Y2 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC26.21■■□□□ 1.79
Sox11Q7M6Y2 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.79
Sox11Q7M6Y2 Gm24970-201ENSMUST00000175582 82 ntBASIC26.2■■□□□ 1.78
Sox11Q7M6Y2 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC26.2■■□□□ 1.78
Sox11Q7M6Y2 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC26.19■■□□□ 1.78
Sox11Q7M6Y2 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
Sox11Q7M6Y2 Gm5987-201ENSMUST00000196433 1151 ntBASIC26.18■■□□□ 1.78
Sox11Q7M6Y2 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC26.17■■□□□ 1.78
Sox11Q7M6Y2 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC26.17■■□□□ 1.78
Sox11Q7M6Y2 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC26.17■■□□□ 1.78
Sox11Q7M6Y2 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC26.15■■□□□ 1.78
Sox11Q7M6Y2 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC26.14■■□□□ 1.77
Sox11Q7M6Y2 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC26.13■■□□□ 1.77
Sox11Q7M6Y2 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC26.13■■□□□ 1.77
Sox11Q7M6Y2 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
Sox11Q7M6Y2 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC26.1■■□□□ 1.77
Sox11Q7M6Y2 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC26.1■■□□□ 1.77
Sox11Q7M6Y2 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC26.09■■□□□ 1.77
Sox11Q7M6Y2 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC26.09■■□□□ 1.77
Sox11Q7M6Y2 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC26.05■■□□□ 1.76
Sox11Q7M6Y2 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC26.05■■□□□ 1.76
Sox11Q7M6Y2 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC26.03■■□□□ 1.76
Sox11Q7M6Y2 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
Sox11Q7M6Y2 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC26.02■■□□□ 1.76
Sox11Q7M6Y2 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC26.02■■□□□ 1.76
Retrieved 100 of 76,532 protein–RNA pairs in 57.9 ms