Protein–RNA interactions for Protein: Q6ZWR6

Syne1, Nesprin-1, mousemouse

Predictions only

Length 8,799 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syne1Q6ZWR6 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
Syne1Q6ZWR6 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC9.06□□□□□ -0.96
Syne1Q6ZWR6 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
Syne1Q6ZWR6 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC9.05□□□□□ -0.96
Syne1Q6ZWR6 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC9.05□□□□□ -0.96
Syne1Q6ZWR6 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Syne1Q6ZWR6 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC9.04□□□□□ -0.96
Syne1Q6ZWR6 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC9.04□□□□□ -0.96
Syne1Q6ZWR6 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC9.04□□□□□ -0.96
Syne1Q6ZWR6 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Syne1Q6ZWR6 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Syne1Q6ZWR6 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC9.03□□□□□ -0.96
Syne1Q6ZWR6 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Syne1Q6ZWR6 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC9.03□□□□□ -0.96
Syne1Q6ZWR6 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.96
Syne1Q6ZWR6 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC9.02□□□□□ -0.96
Syne1Q6ZWR6 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
Syne1Q6ZWR6 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
Syne1Q6ZWR6 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC9.02□□□□□ -0.97
Syne1Q6ZWR6 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Syne1Q6ZWR6 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC9.01□□□□□ -0.97
Syne1Q6ZWR6 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC9.01□□□□□ -0.97
Syne1Q6ZWR6 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Syne1Q6ZWR6 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC9.01□□□□□ -0.97
Syne1Q6ZWR6 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC9□□□□□ -0.97
Syne1Q6ZWR6 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Syne1Q6ZWR6 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC8.99□□□□□ -0.97
Syne1Q6ZWR6 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Syne1Q6ZWR6 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC8.99□□□□□ -0.97
Syne1Q6ZWR6 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
Syne1Q6ZWR6 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Syne1Q6ZWR6 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Syne1Q6ZWR6 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC8.97□□□□□ -0.97
Syne1Q6ZWR6 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC8.96□□□□□ -0.98
Syne1Q6ZWR6 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
Syne1Q6ZWR6 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
Syne1Q6ZWR6 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC8.95□□□□□ -0.98
Syne1Q6ZWR6 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
Syne1Q6ZWR6 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
Syne1Q6ZWR6 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC8.95□□□□□ -0.98
Syne1Q6ZWR6 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC8.94□□□□□ -0.98
Syne1Q6ZWR6 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
Syne1Q6ZWR6 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC8.94□□□□□ -0.98
Syne1Q6ZWR6 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
Syne1Q6ZWR6 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
Syne1Q6ZWR6 Gm9397-201ENSMUST00000200125 605 ntBASIC8.94□□□□□ -0.98
Syne1Q6ZWR6 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
Syne1Q6ZWR6 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC8.93□□□□□ -0.98
Syne1Q6ZWR6 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC8.93□□□□□ -0.98
Syne1Q6ZWR6 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
Syne1Q6ZWR6 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Syne1Q6ZWR6 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
Syne1Q6ZWR6 Mipep-204ENSMUST00000225043 1548 ntBASIC8.92□□□□□ -0.98
Syne1Q6ZWR6 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Syne1Q6ZWR6 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC8.92□□□□□ -0.98
Syne1Q6ZWR6 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC8.92□□□□□ -0.98
Syne1Q6ZWR6 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Syne1Q6ZWR6 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Syne1Q6ZWR6 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC8.9□□□□□ -0.98
Syne1Q6ZWR6 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC8.89□□□□□ -0.99
Syne1Q6ZWR6 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC8.89□□□□□ -0.99
Syne1Q6ZWR6 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC8.89□□□□□ -0.99
Syne1Q6ZWR6 Gm5987-201ENSMUST00000196433 1151 ntBASIC8.89□□□□□ -0.99
Syne1Q6ZWR6 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Syne1Q6ZWR6 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC8.88□□□□□ -0.99
Syne1Q6ZWR6 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
Syne1Q6ZWR6 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
Syne1Q6ZWR6 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC8.86□□□□□ -0.99
Syne1Q6ZWR6 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC8.85□□□□□ -0.99
Syne1Q6ZWR6 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
Syne1Q6ZWR6 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC8.85□□□□□ -0.99
Syne1Q6ZWR6 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
Syne1Q6ZWR6 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
Syne1Q6ZWR6 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Syne1Q6ZWR6 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC8.84□□□□□ -0.99
Syne1Q6ZWR6 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC8.84□□□□□ -0.99
Syne1Q6ZWR6 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC8.84□□□□□ -0.99
Syne1Q6ZWR6 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC8.82□□□□□ -1
Syne1Q6ZWR6 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC8.82□□□□□ -1
Syne1Q6ZWR6 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Syne1Q6ZWR6 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Syne1Q6ZWR6 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Syne1Q6ZWR6 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC8.81□□□□□ -1
Syne1Q6ZWR6 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC8.81□□□□□ -1
Syne1Q6ZWR6 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC8.81□□□□□ -1
Syne1Q6ZWR6 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC8.81□□□□□ -1
Syne1Q6ZWR6 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC8.8□□□□□ -1
Syne1Q6ZWR6 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC8.8□□□□□ -1
Syne1Q6ZWR6 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Syne1Q6ZWR6 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Syne1Q6ZWR6 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC8.78□□□□□ -1
Syne1Q6ZWR6 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC8.78□□□□□ -1
Syne1Q6ZWR6 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Syne1Q6ZWR6 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC8.77□□□□□ -1
Syne1Q6ZWR6 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1
Syne1Q6ZWR6 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC8.77□□□□□ -1
Syne1Q6ZWR6 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC8.77□□□□□ -1.01
Syne1Q6ZWR6 Gm24970-201ENSMUST00000175582 82 ntBASIC8.77□□□□□ -1.01
Syne1Q6ZWR6 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
Syne1Q6ZWR6 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC8.76□□□□□ -1.01
Retrieved 100 of 76,532 protein–RNA pairs in 26.2 ms