Protein–RNA interactions for Protein: Q6YI28

2210407C18Rik, EP1, mousemouse

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
2210407C18RikQ6YI28 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
2210407C18RikQ6YI28 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC23.13■■□□□ 1.29
2210407C18RikQ6YI28 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
2210407C18RikQ6YI28 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
2210407C18RikQ6YI28 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
2210407C18RikQ6YI28 Gm27322-201ENSMUST00000184007 104 ntBASIC23.06■■□□□ 1.28
2210407C18RikQ6YI28 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC23.06■■□□□ 1.28
2210407C18RikQ6YI28 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
2210407C18RikQ6YI28 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
2210407C18RikQ6YI28 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC23.05■■□□□ 1.28
2210407C18RikQ6YI28 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC23.04■■□□□ 1.28
2210407C18RikQ6YI28 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC23.04■■□□□ 1.28
2210407C18RikQ6YI28 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC23.02■■□□□ 1.28
2210407C18RikQ6YI28 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
2210407C18RikQ6YI28 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC22.99■■□□□ 1.27
2210407C18RikQ6YI28 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC22.98■■□□□ 1.27
2210407C18RikQ6YI28 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
2210407C18RikQ6YI28 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC22.97■■□□□ 1.27
2210407C18RikQ6YI28 AC153504.1-201ENSMUST00000218379 2290 ntBASIC22.96■■□□□ 1.27
2210407C18RikQ6YI28 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
2210407C18RikQ6YI28 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
2210407C18RikQ6YI28 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
2210407C18RikQ6YI28 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC22.92■■□□□ 1.26
2210407C18RikQ6YI28 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC22.91■■□□□ 1.26
2210407C18RikQ6YI28 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
2210407C18RikQ6YI28 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC22.9■■□□□ 1.26
2210407C18RikQ6YI28 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
2210407C18RikQ6YI28 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
2210407C18RikQ6YI28 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC22.88■■□□□ 1.25
2210407C18RikQ6YI28 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC22.88■■□□□ 1.25
2210407C18RikQ6YI28 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
2210407C18RikQ6YI28 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
2210407C18RikQ6YI28 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC22.87■■□□□ 1.25
2210407C18RikQ6YI28 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
2210407C18RikQ6YI28 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC22.86■■□□□ 1.25
2210407C18RikQ6YI28 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
2210407C18RikQ6YI28 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC22.85■■□□□ 1.25
2210407C18RikQ6YI28 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC22.84■■□□□ 1.25
2210407C18RikQ6YI28 AC166822.3-201ENSMUST00000227394 661 ntBASIC22.84■■□□□ 1.25
2210407C18RikQ6YI28 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC22.82■■□□□ 1.24
2210407C18RikQ6YI28 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC22.8■■□□□ 1.24
2210407C18RikQ6YI28 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
2210407C18RikQ6YI28 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC22.79■■□□□ 1.24
2210407C18RikQ6YI28 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC22.78■■□□□ 1.24
2210407C18RikQ6YI28 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
2210407C18RikQ6YI28 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
2210407C18RikQ6YI28 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
2210407C18RikQ6YI28 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
2210407C18RikQ6YI28 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC22.74■■□□□ 1.23
2210407C18RikQ6YI28 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
2210407C18RikQ6YI28 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
2210407C18RikQ6YI28 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
2210407C18RikQ6YI28 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
2210407C18RikQ6YI28 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
2210407C18RikQ6YI28 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
2210407C18RikQ6YI28 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
2210407C18RikQ6YI28 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
2210407C18RikQ6YI28 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
2210407C18RikQ6YI28 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC22.64■■□□□ 1.21
2210407C18RikQ6YI28 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
2210407C18RikQ6YI28 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC22.62■■□□□ 1.21
2210407C18RikQ6YI28 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
2210407C18RikQ6YI28 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
2210407C18RikQ6YI28 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC22.6■■□□□ 1.21
2210407C18RikQ6YI28 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
2210407C18RikQ6YI28 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC22.59■■□□□ 1.21
2210407C18RikQ6YI28 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC22.58■■□□□ 1.21
2210407C18RikQ6YI28 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
2210407C18RikQ6YI28 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC22.58■■□□□ 1.21
2210407C18RikQ6YI28 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
2210407C18RikQ6YI28 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC22.58■■□□□ 1.21
2210407C18RikQ6YI28 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC22.58■■□□□ 1.2
2210407C18RikQ6YI28 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
2210407C18RikQ6YI28 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC22.57■■□□□ 1.2
2210407C18RikQ6YI28 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
2210407C18RikQ6YI28 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
2210407C18RikQ6YI28 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
2210407C18RikQ6YI28 Gm9905-201ENSMUST00000065740 1845 ntBASIC22.54■■□□□ 1.2
2210407C18RikQ6YI28 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
2210407C18RikQ6YI28 Gm24804-201ENSMUST00000174982 85 ntBASIC22.52■■□□□ 1.2
2210407C18RikQ6YI28 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
2210407C18RikQ6YI28 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC22.52■■□□□ 1.2
2210407C18RikQ6YI28 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC22.52■■□□□ 1.2
2210407C18RikQ6YI28 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
2210407C18RikQ6YI28 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC22.5■■□□□ 1.19
2210407C18RikQ6YI28 Zxda-201ENSMUST00000117281 2621 ntBASIC22.5■■□□□ 1.19
2210407C18RikQ6YI28 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
2210407C18RikQ6YI28 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
2210407C18RikQ6YI28 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC22.48■■□□□ 1.19
2210407C18RikQ6YI28 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC22.47■■□□□ 1.19
2210407C18RikQ6YI28 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
2210407C18RikQ6YI28 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC22.47■■□□□ 1.19
2210407C18RikQ6YI28 Gm6345-201ENSMUST00000180378 1691 ntBASIC22.46■■□□□ 1.19
2210407C18RikQ6YI28 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC22.45■■□□□ 1.19
2210407C18RikQ6YI28 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC22.45■■□□□ 1.18
2210407C18RikQ6YI28 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
2210407C18RikQ6YI28 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
2210407C18RikQ6YI28 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
2210407C18RikQ6YI28 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC22.43■■□□□ 1.18
2210407C18RikQ6YI28 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC22.43■■□□□ 1.18
Retrieved 100 of 76,532 protein–RNA pairs in 12.4 ms