Protein–RNA interactions for Protein: Q61268

Apoc4, Apolipoprotein C-IV, mousemouse

Predictions only

Length 124 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Apoc4Q61268 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Apoc4Q61268 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Apoc4Q61268 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Apoc4Q61268 AC153890.1-201ENSMUST00000220021 2469 ntBASIC16.35■□□□□ 0.21
Apoc4Q61268 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
Apoc4Q61268 Gm24109-201ENSMUST00000175489 103 ntBASIC16.34■□□□□ 0.21
Apoc4Q61268 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Apoc4Q61268 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Apoc4Q61268 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Apoc4Q61268 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Apoc4Q61268 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Apoc4Q61268 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Apoc4Q61268 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Apoc4Q61268 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC16.28■□□□□ 0.2
Apoc4Q61268 Gm2415-204ENSMUST00000190235 2004 ntBASIC16.28■□□□□ 0.2
Apoc4Q61268 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC16.27■□□□□ 0.19
Apoc4Q61268 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
Apoc4Q61268 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
Apoc4Q61268 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Apoc4Q61268 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Apoc4Q61268 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Apoc4Q61268 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Apoc4Q61268 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Apoc4Q61268 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC16.22■□□□□ 0.19
Apoc4Q61268 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Apoc4Q61268 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Apoc4Q61268 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Apoc4Q61268 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
Apoc4Q61268 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Apoc4Q61268 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Apoc4Q61268 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Apoc4Q61268 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC16.2■□□□□ 0.18
Apoc4Q61268 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Apoc4Q61268 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Apoc4Q61268 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Apoc4Q61268 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Apoc4Q61268 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Apoc4Q61268 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Apoc4Q61268 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Apoc4Q61268 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Apoc4Q61268 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Apoc4Q61268 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Apoc4Q61268 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Apoc4Q61268 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Apoc4Q61268 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC16.15■□□□□ 0.18
Apoc4Q61268 AC122428.3-201ENSMUST00000215551 2290 ntBASIC16.15■□□□□ 0.18
Apoc4Q61268 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Apoc4Q61268 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Apoc4Q61268 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Apoc4Q61268 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Apoc4Q61268 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Apoc4Q61268 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Apoc4Q61268 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
Apoc4Q61268 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Apoc4Q61268 Gm23366-201ENSMUST00000175022 89 ntBASIC16.12■□□□□ 0.17
Apoc4Q61268 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Apoc4Q61268 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Apoc4Q61268 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
Apoc4Q61268 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Apoc4Q61268 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
Apoc4Q61268 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
Apoc4Q61268 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Apoc4Q61268 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Apoc4Q61268 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Apoc4Q61268 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC16.09■□□□□ 0.17
Apoc4Q61268 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
Apoc4Q61268 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Apoc4Q61268 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Apoc4Q61268 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Apoc4Q61268 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Apoc4Q61268 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
Apoc4Q61268 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
Apoc4Q61268 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
Apoc4Q61268 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Apoc4Q61268 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Apoc4Q61268 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Apoc4Q61268 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
Apoc4Q61268 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Apoc4Q61268 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Apoc4Q61268 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Apoc4Q61268 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
Apoc4Q61268 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Apoc4Q61268 Amer2-203ENSMUST00000225247 2662 ntBASIC16.03■□□□□ 0.16
Apoc4Q61268 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Apoc4Q61268 Fezf2-202ENSMUST00000224023 1917 ntBASIC16.02■□□□□ 0.15
Apoc4Q61268 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Apoc4Q61268 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
Apoc4Q61268 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Apoc4Q61268 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Apoc4Q61268 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC16■□□□□ 0.15
Apoc4Q61268 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
Apoc4Q61268 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC16■□□□□ 0.15
Apoc4Q61268 Gm43445-201ENSMUST00000198564 2091 ntBASIC16■□□□□ 0.15
Apoc4Q61268 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
Apoc4Q61268 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Apoc4Q61268 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
Apoc4Q61268 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC15.99■□□□□ 0.15
Apoc4Q61268 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC15.99■□□□□ 0.15
Apoc4Q61268 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Apoc4Q61268 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 99.1 ms