Protein–RNA interactions for Protein: P23440

Pde6b, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, mousemouse

Predictions only

Length 856 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6bP23440 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC28.69■■■□□ 2.18
Pde6bP23440 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC28.69■■■□□ 2.18
Pde6bP23440 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC28.68■■■□□ 2.18
Pde6bP23440 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC28.67■■■□□ 2.18
Pde6bP23440 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC28.67■■■□□ 2.18
Pde6bP23440 Tdp2-203ENSMUST00000223804 1136 ntBASIC28.65■■■□□ 2.18
Pde6bP23440 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC28.65■■■□□ 2.18
Pde6bP23440 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC28.65■■■□□ 2.18
Pde6bP23440 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC28.63■■■□□ 2.17
Pde6bP23440 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC28.61■■■□□ 2.17
Pde6bP23440 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC28.58■■■□□ 2.17
Pde6bP23440 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC28.57■■■□□ 2.16
Pde6bP23440 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC28.57■■■□□ 2.16
Pde6bP23440 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC28.57■■■□□ 2.16
Pde6bP23440 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC28.56■■■□□ 2.16
Pde6bP23440 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC28.56■■■□□ 2.16
Pde6bP23440 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC28.54■■■□□ 2.16
Pde6bP23440 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC28.54■■■□□ 2.16
Pde6bP23440 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC28.53■■■□□ 2.16
Pde6bP23440 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC28.51■■■□□ 2.16
Pde6bP23440 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC28.5■■■□□ 2.15
Pde6bP23440 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC28.49■■■□□ 2.15
Pde6bP23440 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC28.48■■■□□ 2.15
Pde6bP23440 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC28.46■■■□□ 2.15
Pde6bP23440 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC28.45■■■□□ 2.14
Pde6bP23440 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC28.45■■■□□ 2.14
Pde6bP23440 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC28.44■■■□□ 2.14
Pde6bP23440 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC28.41■■■□□ 2.14
Pde6bP23440 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC28.4■■■□□ 2.14
Pde6bP23440 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC28.39■■■□□ 2.14
Pde6bP23440 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC28.39■■■□□ 2.14
Pde6bP23440 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC28.38■■■□□ 2.13
Pde6bP23440 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC28.34■■■□□ 2.13
Pde6bP23440 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.13
Pde6bP23440 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
Pde6bP23440 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC28.31■■■□□ 2.12
Pde6bP23440 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC28.31■■■□□ 2.12
Pde6bP23440 Gm45855-201ENSMUST00000212546 880 ntBASIC28.3■■■□□ 2.12
Pde6bP23440 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC28.29■■■□□ 2.12
Pde6bP23440 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC28.29■■■□□ 2.12
Pde6bP23440 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC28.27■■■□□ 2.12
Pde6bP23440 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
Pde6bP23440 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC28.26■■■□□ 2.11
Pde6bP23440 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC28.25■■■□□ 2.11
Pde6bP23440 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
Pde6bP23440 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC28.22■■■□□ 2.11
Pde6bP23440 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
Pde6bP23440 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC28.2■■■□□ 2.1
Pde6bP23440 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
Pde6bP23440 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC28.19■■■□□ 2.1
Pde6bP23440 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC28.19■■■□□ 2.1
Pde6bP23440 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC28.17■■■□□ 2.1
Pde6bP23440 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC28.17■■■□□ 2.1
Pde6bP23440 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
Pde6bP23440 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.1
Pde6bP23440 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC28.12■■■□□ 2.09
Pde6bP23440 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC28.12■■■□□ 2.09
Pde6bP23440 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC28.12■■■□□ 2.09
Pde6bP23440 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC28.1■■■□□ 2.09
Pde6bP23440 Gm9397-201ENSMUST00000200125 605 ntBASIC28.1■■■□□ 2.09
Pde6bP23440 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC28.08■■■□□ 2.09
Pde6bP23440 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC28.08■■■□□ 2.09
Pde6bP23440 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC28.07■■■□□ 2.08
Pde6bP23440 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC28.05■■■□□ 2.08
Pde6bP23440 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC28.03■■■□□ 2.08
Pde6bP23440 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC28.02■■■□□ 2.08
Pde6bP23440 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC28.01■■■□□ 2.07
Pde6bP23440 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC28.01■■■□□ 2.07
Pde6bP23440 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC28■■■□□ 2.07
Pde6bP23440 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC27.98■■■□□ 2.07
Pde6bP23440 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC27.97■■■□□ 2.07
Pde6bP23440 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC27.96■■■□□ 2.07
Pde6bP23440 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC27.96■■■□□ 2.07
Pde6bP23440 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC27.95■■■□□ 2.07
Pde6bP23440 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC27.95■■■□□ 2.06
Pde6bP23440 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC27.94■■■□□ 2.06
Pde6bP23440 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC27.93■■■□□ 2.06
Pde6bP23440 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC27.92■■■□□ 2.06
Pde6bP23440 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC27.92■■■□□ 2.06
Pde6bP23440 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC27.91■■■□□ 2.06
Pde6bP23440 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC27.9■■■□□ 2.06
Pde6bP23440 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC27.9■■■□□ 2.06
Pde6bP23440 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC27.89■■■□□ 2.06
Pde6bP23440 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC27.89■■■□□ 2.05
Pde6bP23440 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC27.87■■■□□ 2.05
Pde6bP23440 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC27.87■■■□□ 2.05
Pde6bP23440 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC27.87■■■□□ 2.05
Pde6bP23440 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC27.86■■■□□ 2.05
Pde6bP23440 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC27.85■■■□□ 2.05
Pde6bP23440 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC27.85■■■□□ 2.05
Pde6bP23440 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC27.84■■■□□ 2.05
Pde6bP23440 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC27.83■■■□□ 2.05
Pde6bP23440 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC27.83■■■□□ 2.05
Pde6bP23440 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC27.83■■■□□ 2.05
Pde6bP23440 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC27.81■■■□□ 2.04
Pde6bP23440 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC27.81■■■□□ 2.04
Pde6bP23440 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC27.79■■■□□ 2.04
Pde6bP23440 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC27.77■■■□□ 2.04
Pde6bP23440 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC27.77■■■□□ 2.04
Pde6bP23440 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC27.77■■■□□ 2.04
Retrieved 100 of 76,532 protein–RNA pairs in 11.7 ms