Protein–RNA interactions for Protein: P01796

Ig heavy chain V-III region A4, mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01796 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
P01796 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
P01796 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
P01796 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
P01796 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
P01796 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC21.49■■□□□ 1.03
P01796 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
P01796 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
P01796 Gm2415-204ENSMUST00000190235 2004 ntBASIC21.45■■□□□ 1.02
P01796 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC21.44■■□□□ 1.02
P01796 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
P01796 Zfp131-205ENSMUST00000223812 663 ntBASIC21.44■■□□□ 1.02
P01796 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC21.43■■□□□ 1.02
P01796 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
P01796 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
P01796 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
P01796 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
P01796 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
P01796 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
P01796 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
P01796 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC21.36■■□□□ 1.01
P01796 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
P01796 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
P01796 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC21.34■■□□□ 1.01
P01796 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC21.33■■□□□ 1
P01796 Gm6658-202ENSMUST00000209493 1885 ntBASIC21.32■■□□□ 1
P01796 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC21.32■■□□□ 1
P01796 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC21.31■■□□□ 1
P01796 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
P01796 Gm16148-201ENSMUST00000119653 893 ntBASIC21.3■■□□□ 1
P01796 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
P01796 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
P01796 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
P01796 AC153504.1-201ENSMUST00000218379 2290 ntBASIC21.26■□□□□ 0.99
P01796 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
P01796 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
P01796 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
P01796 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
P01796 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC21.23■□□□□ 0.99
P01796 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
P01796 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
P01796 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
P01796 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC21.2■□□□□ 0.98
P01796 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
P01796 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC21.19■□□□□ 0.98
P01796 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
P01796 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
P01796 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC21.18■□□□□ 0.98
P01796 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
P01796 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
P01796 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
P01796 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
P01796 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC21.15■□□□□ 0.98
P01796 Peli2-204ENSMUST00000226513 1320 ntBASIC21.14■□□□□ 0.97
P01796 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
P01796 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
P01796 Mipep-204ENSMUST00000225043 1548 ntBASIC21.13■□□□□ 0.97
P01796 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
P01796 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
P01796 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
P01796 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
P01796 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
P01796 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.96
P01796 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
P01796 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
P01796 Tdp2-203ENSMUST00000223804 1136 ntBASIC21.06■□□□□ 0.96
P01796 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
P01796 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
P01796 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC21.04■□□□□ 0.96
P01796 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
P01796 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
P01796 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC21■□□□□ 0.95
P01796 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
P01796 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
P01796 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC20.98■□□□□ 0.95
P01796 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
P01796 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
P01796 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
P01796 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
P01796 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC20.97■□□□□ 0.95
P01796 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
P01796 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
P01796 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
P01796 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
P01796 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
P01796 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
P01796 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
P01796 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
P01796 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
P01796 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC20.91■□□□□ 0.94
P01796 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC20.91■□□□□ 0.94
P01796 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
P01796 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
P01796 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC20.9■□□□□ 0.94
P01796 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
P01796 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
P01796 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC20.89■□□□□ 0.93
P01796 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
P01796 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
P01796 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Retrieved 100 of 76,532 protein–RNA pairs in 35.9 ms