Protein–RNA interactions for Protein: O88990

Actn3, Alpha-actinin-3, mousemouse

Known RBP Predictions only

Length 900 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Actn3O88990 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC28.78■■■□□ 2.2
Actn3O88990 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC28.78■■■□□ 2.2
Actn3O88990 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC28.77■■■□□ 2.2
Actn3O88990 Zxda-201ENSMUST00000117281 2621 ntBASIC28.76■■■□□ 2.2
Actn3O88990 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC28.75■■■□□ 2.19
Actn3O88990 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC28.74■■■□□ 2.19
Actn3O88990 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC28.7■■■□□ 2.18
Actn3O88990 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC28.69■■■□□ 2.18
Actn3O88990 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC28.69■■■□□ 2.18
Actn3O88990 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC28.68■■■□□ 2.18
Actn3O88990 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC28.66■■■□□ 2.18
Actn3O88990 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC28.63■■■□□ 2.17
Actn3O88990 Zfp131-207ENSMUST00000224946 1783 ntBASIC28.62■■■□□ 2.17
Actn3O88990 Gm2415-204ENSMUST00000190235 2004 ntBASIC28.62■■■□□ 2.17
Actn3O88990 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC28.61■■■□□ 2.17
Actn3O88990 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC28.61■■■□□ 2.17
Actn3O88990 Zfp131-205ENSMUST00000223812 663 ntBASIC28.61■■■□□ 2.17
Actn3O88990 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC28.61■■■□□ 2.17
Actn3O88990 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC28.59■■■□□ 2.17
Actn3O88990 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC28.57■■■□□ 2.16
Actn3O88990 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC28.57■■■□□ 2.16
Actn3O88990 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC28.55■■■□□ 2.16
Actn3O88990 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC28.55■■■□□ 2.16
Actn3O88990 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC28.52■■■□□ 2.16
Actn3O88990 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC28.5■■■□□ 2.15
Actn3O88990 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC28.5■■■□□ 2.15
Actn3O88990 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC28.47■■■□□ 2.15
Actn3O88990 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC28.47■■■□□ 2.15
Actn3O88990 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC28.46■■■□□ 2.15
Actn3O88990 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC28.45■■■□□ 2.14
Actn3O88990 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC28.44■■■□□ 2.14
Actn3O88990 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC28.43■■■□□ 2.14
Actn3O88990 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC28.41■■■□□ 2.14
Actn3O88990 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC28.41■■■□□ 2.14
Actn3O88990 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC28.41■■■□□ 2.14
Actn3O88990 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC28.41■■■□□ 2.14
Actn3O88990 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC28.4■■■□□ 2.14
Actn3O88990 Gm16148-201ENSMUST00000119653 893 ntBASIC28.39■■■□□ 2.14
Actn3O88990 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC28.37■■■□□ 2.13
Actn3O88990 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC28.37■■■□□ 2.13
Actn3O88990 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC28.36■■■□□ 2.13
Actn3O88990 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC28.34■■■□□ 2.13
Actn3O88990 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC28.32■■■□□ 2.12
Actn3O88990 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC28.31■■■□□ 2.12
Actn3O88990 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC28.31■■■□□ 2.12
Actn3O88990 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC28.31■■■□□ 2.12
Actn3O88990 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC28.3■■■□□ 2.12
Actn3O88990 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC28.3■■■□□ 2.12
Actn3O88990 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
Actn3O88990 Gm6658-202ENSMUST00000209493 1885 ntBASIC28.25■■■□□ 2.11
Actn3O88990 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
Actn3O88990 Peli2-204ENSMUST00000226513 1320 ntBASIC28.25■■■□□ 2.11
Actn3O88990 Mipep-204ENSMUST00000225043 1548 ntBASIC28.25■■■□□ 2.11
Actn3O88990 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC28.24■■■□□ 2.11
Actn3O88990 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
Actn3O88990 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC28.22■■■□□ 2.11
Actn3O88990 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC28.22■■■□□ 2.11
Actn3O88990 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC28.21■■■□□ 2.11
Actn3O88990 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
Actn3O88990 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC28.2■■■□□ 2.11
Actn3O88990 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC28.2■■■□□ 2.11
Actn3O88990 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.11
Actn3O88990 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.11
Actn3O88990 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC28.17■■■□□ 2.1
Actn3O88990 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC28.17■■■□□ 2.1
Actn3O88990 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC28.16■■■□□ 2.1
Actn3O88990 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
Actn3O88990 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC28.16■■■□□ 2.1
Actn3O88990 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
Actn3O88990 Gm6206-201ENSMUST00000133472 2199 ntBASIC28.16■■■□□ 2.1
Actn3O88990 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC28.15■■■□□ 2.1
Actn3O88990 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
Actn3O88990 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC28.14■■■□□ 2.1
Actn3O88990 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
Actn3O88990 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC28.12■■■□□ 2.09
Actn3O88990 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC28.11■■■□□ 2.09
Actn3O88990 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC28.11■■■□□ 2.09
Actn3O88990 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC28.11■■■□□ 2.09
Actn3O88990 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC28.1■■■□□ 2.09
Actn3O88990 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC28.09■■■□□ 2.09
Actn3O88990 Gm9905-201ENSMUST00000065740 1845 ntBASIC28.08■■■□□ 2.09
Actn3O88990 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC28.07■■■□□ 2.08
Actn3O88990 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC28.06■■■□□ 2.08
Actn3O88990 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC28.04■■■□□ 2.08
Actn3O88990 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC28.04■■■□□ 2.08
Actn3O88990 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC28.04■■■□□ 2.08
Actn3O88990 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC28.03■■■□□ 2.08
Actn3O88990 Tdp2-203ENSMUST00000223804 1136 ntBASIC28.03■■■□□ 2.08
Actn3O88990 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC28.03■■■□□ 2.08
Actn3O88990 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC28.02■■■□□ 2.08
Actn3O88990 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC28.01■■■□□ 2.07
Actn3O88990 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC28■■■□□ 2.07
Actn3O88990 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC27.99■■■□□ 2.07
Actn3O88990 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC27.99■■■□□ 2.07
Actn3O88990 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC27.98■■■□□ 2.07
Actn3O88990 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC27.98■■■□□ 2.07
Actn3O88990 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC27.98■■■□□ 2.07
Actn3O88990 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC27.97■■■□□ 2.07
Actn3O88990 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC27.96■■■□□ 2.07
Actn3O88990 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC27.94■■■□□ 2.06
Retrieved 100 of 76,532 protein–RNA pairs in 11.9 ms