Protein–RNA interactions for Protein: O88351

Ikbkb, Inhibitor of nuclear factor kappa-B kinase subunit beta, mousemouse

Predictions only

Length 757 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IkbkbO88351 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC28.88■■■□□ 2.21
IkbkbO88351 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC28.85■■■□□ 2.21
IkbkbO88351 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC28.85■■■□□ 2.21
IkbkbO88351 Gm2415-204ENSMUST00000190235 2004 ntBASIC28.84■■■□□ 2.21
IkbkbO88351 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC28.82■■■□□ 2.2
IkbkbO88351 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC28.8■■■□□ 2.2
IkbkbO88351 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC28.8■■■□□ 2.2
IkbkbO88351 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC28.78■■■□□ 2.2
IkbkbO88351 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC28.77■■■□□ 2.2
IkbkbO88351 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC28.76■■■□□ 2.19
IkbkbO88351 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC28.75■■■□□ 2.19
IkbkbO88351 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC28.75■■■□□ 2.19
IkbkbO88351 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC28.74■■■□□ 2.19
IkbkbO88351 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC28.74■■■□□ 2.19
IkbkbO88351 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC28.73■■■□□ 2.19
IkbkbO88351 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC28.72■■■□□ 2.19
IkbkbO88351 Mipep-204ENSMUST00000225043 1548 ntBASIC28.7■■■□□ 2.19
IkbkbO88351 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC28.69■■■□□ 2.18
IkbkbO88351 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC28.69■■■□□ 2.18
IkbkbO88351 AC153504.1-201ENSMUST00000218379 2290 ntBASIC28.68■■■□□ 2.18
IkbkbO88351 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC28.67■■■□□ 2.18
IkbkbO88351 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC28.65■■■□□ 2.18
IkbkbO88351 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC28.65■■■□□ 2.18
IkbkbO88351 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC28.65■■■□□ 2.18
IkbkbO88351 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC28.65■■■□□ 2.18
IkbkbO88351 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC28.65■■■□□ 2.18
IkbkbO88351 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC28.64■■■□□ 2.18
IkbkbO88351 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC28.64■■■□□ 2.18
IkbkbO88351 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC28.64■■■□□ 2.17
IkbkbO88351 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC28.61■■■□□ 2.17
IkbkbO88351 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC28.6■■■□□ 2.17
IkbkbO88351 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC28.57■■■□□ 2.16
IkbkbO88351 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC28.57■■■□□ 2.16
IkbkbO88351 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC28.56■■■□□ 2.16
IkbkbO88351 Gm6658-202ENSMUST00000209493 1885 ntBASIC28.55■■■□□ 2.16
IkbkbO88351 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC28.54■■■□□ 2.16
IkbkbO88351 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC28.52■■■□□ 2.16
IkbkbO88351 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC28.51■■■□□ 2.15
IkbkbO88351 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC28.5■■■□□ 2.15
IkbkbO88351 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC28.48■■■□□ 2.15
IkbkbO88351 Peli2-204ENSMUST00000226513 1320 ntBASIC28.43■■■□□ 2.14
IkbkbO88351 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC28.43■■■□□ 2.14
IkbkbO88351 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC28.43■■■□□ 2.14
IkbkbO88351 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC28.41■■■□□ 2.14
IkbkbO88351 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC28.4■■■□□ 2.14
IkbkbO88351 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC28.4■■■□□ 2.14
IkbkbO88351 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC28.4■■■□□ 2.14
IkbkbO88351 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC28.4■■■□□ 2.14
IkbkbO88351 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC28.38■■■□□ 2.13
IkbkbO88351 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC28.38■■■□□ 2.13
IkbkbO88351 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC28.36■■■□□ 2.13
IkbkbO88351 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC28.36■■■□□ 2.13
IkbkbO88351 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC28.35■■■□□ 2.13
IkbkbO88351 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
IkbkbO88351 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC28.35■■■□□ 2.13
IkbkbO88351 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC28.35■■■□□ 2.13
IkbkbO88351 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC28.33■■■□□ 2.13
IkbkbO88351 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
IkbkbO88351 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
IkbkbO88351 Zfp131-205ENSMUST00000223812 663 ntBASIC28.31■■■□□ 2.12
IkbkbO88351 Gm16148-201ENSMUST00000119653 893 ntBASIC28.3■■■□□ 2.12
IkbkbO88351 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
IkbkbO88351 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC28.29■■■□□ 2.12
IkbkbO88351 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
IkbkbO88351 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC28.28■■■□□ 2.12
IkbkbO88351 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC28.28■■■□□ 2.12
IkbkbO88351 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC28.26■■■□□ 2.11
IkbkbO88351 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC28.25■■■□□ 2.11
IkbkbO88351 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC28.24■■■□□ 2.11
IkbkbO88351 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
IkbkbO88351 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
IkbkbO88351 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC28.23■■■□□ 2.11
IkbkbO88351 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
IkbkbO88351 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC28.22■■■□□ 2.11
IkbkbO88351 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC28.21■■■□□ 2.11
IkbkbO88351 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC28.19■■■□□ 2.1
IkbkbO88351 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC28.18■■■□□ 2.1
IkbkbO88351 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC28.18■■■□□ 2.1
IkbkbO88351 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC28.16■■■□□ 2.1
IkbkbO88351 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC28.16■■■□□ 2.1
IkbkbO88351 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC28.13■■■□□ 2.09
IkbkbO88351 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC28.11■■■□□ 2.09
IkbkbO88351 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC28.11■■■□□ 2.09
IkbkbO88351 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC28.11■■■□□ 2.09
IkbkbO88351 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC28.1■■■□□ 2.09
IkbkbO88351 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC28.09■■■□□ 2.09
IkbkbO88351 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC28.08■■■□□ 2.09
IkbkbO88351 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC28.08■■■□□ 2.09
IkbkbO88351 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC28.06■■■□□ 2.08
IkbkbO88351 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC28.06■■■□□ 2.08
IkbkbO88351 Gm6206-201ENSMUST00000133472 2199 ntBASIC28.04■■■□□ 2.08
IkbkbO88351 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC28.04■■■□□ 2.08
IkbkbO88351 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC28.04■■■□□ 2.08
IkbkbO88351 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC28.04■■■□□ 2.08
IkbkbO88351 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC28.03■■■□□ 2.08
IkbkbO88351 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC28.03■■■□□ 2.08
IkbkbO88351 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC28.02■■■□□ 2.08
IkbkbO88351 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC28.01■■■□□ 2.07
IkbkbO88351 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC28.01■■■□□ 2.07
IkbkbO88351 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC28■■■□□ 2.07
Retrieved 100 of 76,532 protein–RNA pairs in 15 ms