Protein–RNA interactions for Protein: O70584

Nkx2-8, Homeobox protein Nkx-2.8, mousemouse

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-8O70584 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Nkx2-8O70584 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Nkx2-8O70584 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Nkx2-8O70584 AC166822.3-201ENSMUST00000227394 661 ntBASIC20.89■□□□□ 0.93
Nkx2-8O70584 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Nkx2-8O70584 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
Nkx2-8O70584 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC20.88■□□□□ 0.93
Nkx2-8O70584 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Nkx2-8O70584 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Nkx2-8O70584 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Nkx2-8O70584 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Nkx2-8O70584 Zxda-201ENSMUST00000117281 2621 ntBASIC20.85■□□□□ 0.93
Nkx2-8O70584 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
Nkx2-8O70584 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Nkx2-8O70584 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Nkx2-8O70584 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Nkx2-8O70584 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Nkx2-8O70584 Gm6658-202ENSMUST00000209493 1885 ntBASIC20.81■□□□□ 0.92
Nkx2-8O70584 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Nkx2-8O70584 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Nkx2-8O70584 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Nkx2-8O70584 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC20.79■□□□□ 0.92
Nkx2-8O70584 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
Nkx2-8O70584 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Nkx2-8O70584 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC20.77■□□□□ 0.92
Nkx2-8O70584 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Nkx2-8O70584 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Nkx2-8O70584 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Nkx2-8O70584 Gm24804-201ENSMUST00000174982 85 ntBASIC20.74■□□□□ 0.91
Nkx2-8O70584 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Nkx2-8O70584 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Nkx2-8O70584 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Nkx2-8O70584 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Nkx2-8O70584 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC20.7■□□□□ 0.9
Nkx2-8O70584 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
Nkx2-8O70584 Mipep-204ENSMUST00000225043 1548 ntBASIC20.67■□□□□ 0.9
Nkx2-8O70584 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC20.66■□□□□ 0.9
Nkx2-8O70584 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Nkx2-8O70584 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Nkx2-8O70584 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Nkx2-8O70584 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Nkx2-8O70584 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Nkx2-8O70584 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Nkx2-8O70584 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Nkx2-8O70584 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Nkx2-8O70584 Gm9905-201ENSMUST00000065740 1845 ntBASIC20.61■□□□□ 0.89
Nkx2-8O70584 Gm6206-201ENSMUST00000133472 2199 ntBASIC20.59■□□□□ 0.89
Nkx2-8O70584 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Nkx2-8O70584 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Nkx2-8O70584 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
Nkx2-8O70584 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Nkx2-8O70584 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
Nkx2-8O70584 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
Nkx2-8O70584 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Nkx2-8O70584 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Nkx2-8O70584 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Nkx2-8O70584 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Nkx2-8O70584 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Nkx2-8O70584 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Nkx2-8O70584 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Nkx2-8O70584 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Nkx2-8O70584 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Nkx2-8O70584 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Nkx2-8O70584 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
Nkx2-8O70584 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Nkx2-8O70584 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Nkx2-8O70584 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Nkx2-8O70584 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Nkx2-8O70584 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Nkx2-8O70584 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Nkx2-8O70584 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Nkx2-8O70584 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Nkx2-8O70584 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Nkx2-8O70584 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Nkx2-8O70584 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC20.44■□□□□ 0.86
Nkx2-8O70584 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Nkx2-8O70584 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC20.44■□□□□ 0.86
Nkx2-8O70584 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Nkx2-8O70584 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC20.43■□□□□ 0.86
Nkx2-8O70584 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Nkx2-8O70584 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Nkx2-8O70584 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Nkx2-8O70584 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Nkx2-8O70584 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Nkx2-8O70584 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Nkx2-8O70584 Peli2-204ENSMUST00000226513 1320 ntBASIC20.39■□□□□ 0.85
Nkx2-8O70584 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC20.39■□□□□ 0.85
Nkx2-8O70584 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Nkx2-8O70584 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
Nkx2-8O70584 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Nkx2-8O70584 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
Nkx2-8O70584 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Nkx2-8O70584 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Nkx2-8O70584 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
Nkx2-8O70584 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Nkx2-8O70584 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
Nkx2-8O70584 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
Nkx2-8O70584 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Nkx2-8O70584 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Nkx2-8O70584 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 38.8 ms