Protein–RNA interactions for Protein: O70481

Ubr1, E3 ubiquitin-protein ligase UBR1, mousemouse

Predictions only

Length 1,757 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr1O70481 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC35.71■■■■□ 3.31
Ubr1O70481 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC35.71■■■■□ 3.31
Ubr1O70481 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC35.71■■■■□ 3.31
Ubr1O70481 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC35.7■■■■□ 3.3
Ubr1O70481 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC35.69■■■■□ 3.3
Ubr1O70481 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC35.66■■■■□ 3.3
Ubr1O70481 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC35.61■■■■□ 3.29
Ubr1O70481 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC35.61■■■■□ 3.29
Ubr1O70481 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC35.59■■■■□ 3.29
Ubr1O70481 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC35.57■■■■□ 3.28
Ubr1O70481 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC35.54■■■■□ 3.28
Ubr1O70481 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC35.54■■■■□ 3.28
Ubr1O70481 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC35.53■■■■□ 3.28
Ubr1O70481 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC35.51■■■■□ 3.28
Ubr1O70481 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC35.49■■■■□ 3.27
Ubr1O70481 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC35.48■■■■□ 3.27
Ubr1O70481 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC35.48■■■■□ 3.27
Ubr1O70481 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC35.48■■■■□ 3.27
Ubr1O70481 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC35.45■■■■□ 3.27
Ubr1O70481 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC35.43■■■■□ 3.26
Ubr1O70481 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC35.4■■■■□ 3.26
Ubr1O70481 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC35.39■■■■□ 3.26
Ubr1O70481 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC35.38■■■■□ 3.25
Ubr1O70481 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC35.37■■■■□ 3.25
Ubr1O70481 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC35.36■■■■□ 3.25
Ubr1O70481 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC35.35■■■■□ 3.25
Ubr1O70481 Tdp2-203ENSMUST00000223804 1136 ntBASIC35.35■■■■□ 3.25
Ubr1O70481 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC35.31■■■■□ 3.24
Ubr1O70481 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC35.29■■■■□ 3.24
Ubr1O70481 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC35.29■■■■□ 3.24
Ubr1O70481 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC35.24■■■■□ 3.23
Ubr1O70481 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC35.2■■■■□ 3.23
Ubr1O70481 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC35.19■■■■□ 3.22
Ubr1O70481 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC35.18■■■■□ 3.22
Ubr1O70481 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC35.18■■■■□ 3.22
Ubr1O70481 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC35.17■■■■□ 3.22
Ubr1O70481 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC35.16■■■■□ 3.22
Ubr1O70481 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC35.15■■■■□ 3.22
Ubr1O70481 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC35.13■■■■□ 3.21
Ubr1O70481 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC35.12■■■■□ 3.21
Ubr1O70481 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC35.11■■■■□ 3.21
Ubr1O70481 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC35.1■■■■□ 3.21
Ubr1O70481 Gm9397-201ENSMUST00000200125 605 ntBASIC35.09■■■■□ 3.21
Ubr1O70481 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC35.09■■■■□ 3.21
Ubr1O70481 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC35.08■■■■□ 3.21
Ubr1O70481 Gm45855-201ENSMUST00000212546 880 ntBASIC35.06■■■■□ 3.2
Ubr1O70481 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC35.05■■■■□ 3.2
Ubr1O70481 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC35.01■■■■□ 3.2
Ubr1O70481 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC35.01■■■■□ 3.2
Ubr1O70481 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC35■■■■□ 3.19
Ubr1O70481 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC35■■■■□ 3.19
Ubr1O70481 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC35■■■■□ 3.19
Ubr1O70481 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC34.99■■■■□ 3.19
Ubr1O70481 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC34.99■■■■□ 3.19
Ubr1O70481 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC34.98■■■■□ 3.19
Ubr1O70481 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC34.98■■■■□ 3.19
Ubr1O70481 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC34.97■■■■□ 3.19
Ubr1O70481 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC34.97■■■■□ 3.19
Ubr1O70481 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC34.97■■■■□ 3.19
Ubr1O70481 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC34.95■■■■□ 3.18
Ubr1O70481 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC34.94■■■■□ 3.18
Ubr1O70481 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC34.93■■■■□ 3.18
Ubr1O70481 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC34.92■■■■□ 3.18
Ubr1O70481 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC34.89■■■■□ 3.18
Ubr1O70481 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC34.88■■■■□ 3.17
Ubr1O70481 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC34.87■■■■□ 3.17
Ubr1O70481 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC34.87■■■■□ 3.17
Ubr1O70481 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC34.87■■■■□ 3.17
Ubr1O70481 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC34.85■■■■□ 3.17
Ubr1O70481 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC34.84■■■■□ 3.17
Ubr1O70481 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC34.83■■■■□ 3.17
Ubr1O70481 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC34.79■■■■□ 3.16
Ubr1O70481 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC34.77■■■■□ 3.16
Ubr1O70481 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC34.77■■■■□ 3.16
Ubr1O70481 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC34.76■■■■□ 3.16
Ubr1O70481 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC34.76■■■■□ 3.15
Ubr1O70481 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC34.75■■■■□ 3.15
Ubr1O70481 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC34.74■■■■□ 3.15
Ubr1O70481 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC34.73■■■■□ 3.15
Ubr1O70481 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC34.73■■■■□ 3.15
Ubr1O70481 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC34.73■■■■□ 3.15
Ubr1O70481 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC34.68■■■■□ 3.14
Ubr1O70481 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC34.68■■■■□ 3.14
Ubr1O70481 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC34.68■■■■□ 3.14
Ubr1O70481 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC34.67■■■■□ 3.14
Ubr1O70481 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC34.67■■■■□ 3.14
Ubr1O70481 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC34.67■■■■□ 3.14
Ubr1O70481 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC34.67■■■■□ 3.14
Ubr1O70481 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC34.67■■■■□ 3.14
Ubr1O70481 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC34.65■■■■□ 3.14
Ubr1O70481 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC34.65■■■■□ 3.14
Ubr1O70481 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC34.65■■■■□ 3.14
Ubr1O70481 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC34.64■■■■□ 3.14
Ubr1O70481 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC34.63■■■■□ 3.13
Ubr1O70481 Gm24970-201ENSMUST00000175582 82 ntBASIC34.62■■■■□ 3.13
Ubr1O70481 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC34.62■■■■□ 3.13
Ubr1O70481 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC34.62■■■■□ 3.13
Ubr1O70481 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC34.62■■■■□ 3.13
Ubr1O70481 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC34.6■■■■□ 3.13
Ubr1O70481 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC34.6■■■■□ 3.13
Retrieved 100 of 76,532 protein–RNA pairs in 32 ms