Protein–RNA interactions for Protein: O54907

Tnfsf12, Tumor necrosis factor ligand superfamily member 12, mousemouse

Predictions only

Length 249 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfsf12O54907 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC21.3■■□□□ 1
Tnfsf12O54907 Gm6658-202ENSMUST00000209493 1885 ntBASIC21.29■■□□□ 1
Tnfsf12O54907 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC21.29■■□□□ 1
Tnfsf12O54907 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Tnfsf12O54907 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC21.27■■□□□ 1
Tnfsf12O54907 Gm26115-201ENSMUST00000175605 87 ntBASIC21.27■■□□□ 1
Tnfsf12O54907 Gm8109-201ENSMUST00000194076 746 ntBASIC21.26■□□□□ 0.99
Tnfsf12O54907 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC21.23■□□□□ 0.99
Tnfsf12O54907 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Tnfsf12O54907 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC21.21■□□□□ 0.99
Tnfsf12O54907 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.99
Tnfsf12O54907 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Tnfsf12O54907 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Tnfsf12O54907 AC166822.3-201ENSMUST00000227394 661 ntBASIC21.19■□□□□ 0.98
Tnfsf12O54907 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Tnfsf12O54907 AC153504.1-201ENSMUST00000218379 2290 ntBASIC21.13■□□□□ 0.97
Tnfsf12O54907 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
Tnfsf12O54907 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC21.13■□□□□ 0.97
Tnfsf12O54907 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Tnfsf12O54907 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Tnfsf12O54907 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Tnfsf12O54907 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
Tnfsf12O54907 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
Tnfsf12O54907 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Tnfsf12O54907 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Tnfsf12O54907 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Tnfsf12O54907 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Tnfsf12O54907 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Tnfsf12O54907 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Tnfsf12O54907 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Tnfsf12O54907 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Tnfsf12O54907 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Tnfsf12O54907 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Tnfsf12O54907 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Tnfsf12O54907 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Tnfsf12O54907 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Tnfsf12O54907 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Tnfsf12O54907 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Tnfsf12O54907 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Tnfsf12O54907 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
Tnfsf12O54907 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Tnfsf12O54907 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Tnfsf12O54907 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
Tnfsf12O54907 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Tnfsf12O54907 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Tnfsf12O54907 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Tnfsf12O54907 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Tnfsf12O54907 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Tnfsf12O54907 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC20.92■□□□□ 0.94
Tnfsf12O54907 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC20.9■□□□□ 0.94
Tnfsf12O54907 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Tnfsf12O54907 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Tnfsf12O54907 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
Tnfsf12O54907 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC20.89■□□□□ 0.93
Tnfsf12O54907 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Tnfsf12O54907 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Tnfsf12O54907 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
Tnfsf12O54907 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC20.88■□□□□ 0.93
Tnfsf12O54907 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Tnfsf12O54907 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Tnfsf12O54907 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Tnfsf12O54907 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Tnfsf12O54907 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Tnfsf12O54907 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Tnfsf12O54907 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Tnfsf12O54907 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Tnfsf12O54907 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC20.8■□□□□ 0.92
Tnfsf12O54907 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Tnfsf12O54907 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Tnfsf12O54907 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Tnfsf12O54907 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
Tnfsf12O54907 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Tnfsf12O54907 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Tnfsf12O54907 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Tnfsf12O54907 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Tnfsf12O54907 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Tnfsf12O54907 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Tnfsf12O54907 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
Tnfsf12O54907 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Tnfsf12O54907 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC20.73■□□□□ 0.91
Tnfsf12O54907 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
Tnfsf12O54907 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
Tnfsf12O54907 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Tnfsf12O54907 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
Tnfsf12O54907 Peli2-204ENSMUST00000226513 1320 ntBASIC20.72■□□□□ 0.91
Tnfsf12O54907 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC20.71■□□□□ 0.91
Tnfsf12O54907 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Tnfsf12O54907 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Tnfsf12O54907 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC20.7■□□□□ 0.9
Tnfsf12O54907 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Tnfsf12O54907 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Tnfsf12O54907 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
Tnfsf12O54907 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
Tnfsf12O54907 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Tnfsf12O54907 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Tnfsf12O54907 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC20.67■□□□□ 0.9
Tnfsf12O54907 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Tnfsf12O54907 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Tnfsf12O54907 Gm24804-201ENSMUST00000174982 85 ntBASIC20.66■□□□□ 0.9
Tnfsf12O54907 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC20.65■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 8.8 ms