Protein–RNA interactions for Protein: O35516

Notch2, Neurogenic locus notch homolog protein 2, mousemouse

Predictions only

Length 2,470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Notch2O35516 Gm8503-201ENSMUST00000118131 455 ntBASIC21.69■■□□□ 1.06
Notch2O35516 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC21.66■■□□□ 1.06
Notch2O35516 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC21.66■■□□□ 1.06
Notch2O35516 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC21.65■■□□□ 1.06
Notch2O35516 Psd-208ENSMUST00000224556 2034 ntBASIC21.63■■□□□ 1.05
Notch2O35516 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Notch2O35516 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC21.6■■□□□ 1.05
Notch2O35516 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC21.6■■□□□ 1.05
Notch2O35516 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Notch2O35516 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC21.56■■□□□ 1.04
Notch2O35516 Gm9939-201ENSMUST00000067161 1154 ntBASIC21.56■■□□□ 1.04
Notch2O35516 Peli2-204ENSMUST00000226513 1320 ntBASIC21.56■■□□□ 1.04
Notch2O35516 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
Notch2O35516 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC21.51■■□□□ 1.03
Notch2O35516 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Notch2O35516 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
Notch2O35516 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Notch2O35516 Gm6821-201ENSMUST00000107540 542 ntBASIC21.43■■□□□ 1.02
Notch2O35516 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Notch2O35516 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC21.41■■□□□ 1.02
Notch2O35516 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Notch2O35516 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Notch2O35516 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
Notch2O35516 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Notch2O35516 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC21.33■■□□□ 1
Notch2O35516 AL845457.1-201ENSMUST00000197244 68 ntBASIC21.33■■□□□ 1
Notch2O35516 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC21.33■■□□□ 1
Notch2O35516 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC21.32■■□□□ 1
Notch2O35516 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC21.32■■□□□ 1
Notch2O35516 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Notch2O35516 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Notch2O35516 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Notch2O35516 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC21.31■■□□□ 1
Notch2O35516 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Notch2O35516 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC21.28■■□□□ 1
Notch2O35516 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC21.28■■□□□ 1
Notch2O35516 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC21.28■■□□□ 1
Notch2O35516 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Notch2O35516 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Notch2O35516 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Notch2O35516 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
Notch2O35516 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Notch2O35516 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC21.24■□□□□ 0.99
Notch2O35516 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Notch2O35516 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC21.23■□□□□ 0.99
Notch2O35516 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Notch2O35516 Gm7432-201ENSMUST00000210343 879 ntBASIC21.21■□□□□ 0.99
Notch2O35516 Gm24970-201ENSMUST00000175582 82 ntBASIC21.21■□□□□ 0.99
Notch2O35516 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Notch2O35516 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Notch2O35516 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC21.19■□□□□ 0.98
Notch2O35516 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
Notch2O35516 Mir6538-201ENSMUST00000183713 110 ntBASIC21.17■□□□□ 0.98
Notch2O35516 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Notch2O35516 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
Notch2O35516 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Notch2O35516 Cap2-205ENSMUST00000225824 1634 ntBASIC21.09■□□□□ 0.97
Notch2O35516 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Notch2O35516 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC21.07■□□□□ 0.96
Notch2O35516 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC21.07■□□□□ 0.96
Notch2O35516 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC21.07■□□□□ 0.96
Notch2O35516 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Notch2O35516 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC21.06■□□□□ 0.96
Notch2O35516 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Notch2O35516 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Notch2O35516 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC21.05■□□□□ 0.96
Notch2O35516 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Notch2O35516 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC21.03■□□□□ 0.96
Notch2O35516 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Notch2O35516 Gm11175-201ENSMUST00000116172 543 ntBASIC21.01■□□□□ 0.95
Notch2O35516 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC21.01■□□□□ 0.95
Notch2O35516 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC21■□□□□ 0.95
Notch2O35516 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
Notch2O35516 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC20.99■□□□□ 0.95
Notch2O35516 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Notch2O35516 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC20.98■□□□□ 0.95
Notch2O35516 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Notch2O35516 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Notch2O35516 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Notch2O35516 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Notch2O35516 Gm10524-201ENSMUST00000181931 1893 ntBASIC20.92■□□□□ 0.94
Notch2O35516 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Notch2O35516 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
Notch2O35516 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC20.9■□□□□ 0.94
Notch2O35516 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC20.9■□□□□ 0.94
Notch2O35516 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC20.9■□□□□ 0.94
Notch2O35516 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC20.88■□□□□ 0.93
Notch2O35516 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Notch2O35516 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC20.88■□□□□ 0.93
Notch2O35516 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Notch2O35516 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Notch2O35516 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Notch2O35516 Gm42596-201ENSMUST00000196305 1958 ntBASIC20.85■□□□□ 0.93
Notch2O35516 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Notch2O35516 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Notch2O35516 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
Notch2O35516 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Notch2O35516 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Notch2O35516 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Notch2O35516 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Retrieved 100 of 76,532 protein–RNA pairs in 23.4 ms