Protein–RNA interactions for Protein: O08641

Sh3yl1, SH3 domain-containing YSC84-like protein 1, mousemouse

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3yl1O08641 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC24.7■■□□□ 1.54
Sh3yl1O08641 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC24.69■■□□□ 1.54
Sh3yl1O08641 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
Sh3yl1O08641 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
Sh3yl1O08641 Zxda-201ENSMUST00000117281 2621 ntBASIC24.68■■□□□ 1.54
Sh3yl1O08641 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC24.68■■□□□ 1.54
Sh3yl1O08641 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC24.67■■□□□ 1.54
Sh3yl1O08641 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
Sh3yl1O08641 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
Sh3yl1O08641 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.53
Sh3yl1O08641 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
Sh3yl1O08641 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
Sh3yl1O08641 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
Sh3yl1O08641 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC24.6■■□□□ 1.53
Sh3yl1O08641 AC153504.1-201ENSMUST00000218379 2290 ntBASIC24.59■■□□□ 1.53
Sh3yl1O08641 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC24.58■■□□□ 1.53
Sh3yl1O08641 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
Sh3yl1O08641 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC24.54■■□□□ 1.52
Sh3yl1O08641 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
Sh3yl1O08641 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
Sh3yl1O08641 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
Sh3yl1O08641 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
Sh3yl1O08641 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC24.51■■□□□ 1.51
Sh3yl1O08641 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
Sh3yl1O08641 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
Sh3yl1O08641 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
Sh3yl1O08641 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
Sh3yl1O08641 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
Sh3yl1O08641 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
Sh3yl1O08641 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC24.45■■□□□ 1.51
Sh3yl1O08641 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC24.45■■□□□ 1.5
Sh3yl1O08641 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
Sh3yl1O08641 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
Sh3yl1O08641 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC24.44■■□□□ 1.5
Sh3yl1O08641 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
Sh3yl1O08641 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC24.42■■□□□ 1.5
Sh3yl1O08641 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
Sh3yl1O08641 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
Sh3yl1O08641 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
Sh3yl1O08641 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC24.35■■□□□ 1.49
Sh3yl1O08641 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
Sh3yl1O08641 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
Sh3yl1O08641 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
Sh3yl1O08641 Peli2-204ENSMUST00000226513 1320 ntBASIC24.35■■□□□ 1.49
Sh3yl1O08641 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
Sh3yl1O08641 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC24.31■■□□□ 1.48
Sh3yl1O08641 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC24.31■■□□□ 1.48
Sh3yl1O08641 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
Sh3yl1O08641 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC24.29■■□□□ 1.48
Sh3yl1O08641 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC24.28■■□□□ 1.48
Sh3yl1O08641 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
Sh3yl1O08641 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
Sh3yl1O08641 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC24.26■■□□□ 1.47
Sh3yl1O08641 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC24.25■■□□□ 1.47
Sh3yl1O08641 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
Sh3yl1O08641 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC24.24■■□□□ 1.47
Sh3yl1O08641 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
Sh3yl1O08641 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
Sh3yl1O08641 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
Sh3yl1O08641 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC24.23■■□□□ 1.47
Sh3yl1O08641 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
Sh3yl1O08641 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC24.22■■□□□ 1.47
Sh3yl1O08641 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC24.19■■□□□ 1.46
Sh3yl1O08641 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC24.18■■□□□ 1.46
Sh3yl1O08641 Gm16148-201ENSMUST00000119653 893 ntBASIC24.18■■□□□ 1.46
Sh3yl1O08641 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
Sh3yl1O08641 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
Sh3yl1O08641 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
Sh3yl1O08641 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC24.14■■□□□ 1.46
Sh3yl1O08641 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
Sh3yl1O08641 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
Sh3yl1O08641 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
Sh3yl1O08641 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
Sh3yl1O08641 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
Sh3yl1O08641 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC24.11■■□□□ 1.45
Sh3yl1O08641 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
Sh3yl1O08641 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC24.09■■□□□ 1.45
Sh3yl1O08641 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
Sh3yl1O08641 Gm2415-204ENSMUST00000190235 2004 ntBASIC24.08■■□□□ 1.45
Sh3yl1O08641 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC24.08■■□□□ 1.44
Sh3yl1O08641 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC24.07■■□□□ 1.44
Sh3yl1O08641 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC24.07■■□□□ 1.44
Sh3yl1O08641 Zfp131-205ENSMUST00000223812 663 ntBASIC24.07■■□□□ 1.44
Sh3yl1O08641 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
Sh3yl1O08641 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
Sh3yl1O08641 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
Sh3yl1O08641 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC24.03■■□□□ 1.44
Sh3yl1O08641 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
Sh3yl1O08641 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
Sh3yl1O08641 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC24■■□□□ 1.43
Sh3yl1O08641 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC24■■□□□ 1.43
Sh3yl1O08641 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
Sh3yl1O08641 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
Sh3yl1O08641 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC23.98■■□□□ 1.43
Sh3yl1O08641 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
Sh3yl1O08641 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
Sh3yl1O08641 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC23.96■■□□□ 1.43
Sh3yl1O08641 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC23.95■■□□□ 1.42
Sh3yl1O08641 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
Sh3yl1O08641 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
Retrieved 100 of 76,532 protein–RNA pairs in 15.7 ms