Protein–RNA interactions for Protein: E9Q735

Ube4a, Ubiquitin conjugation factor E4 A, mousemouse

Predictions only

Length 1,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube4aE9Q735 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC32.56■■■□□ 2.8
Ube4aE9Q735 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC32.56■■■□□ 2.8
Ube4aE9Q735 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC32.56■■■□□ 2.8
Ube4aE9Q735 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC32.54■■■□□ 2.8
Ube4aE9Q735 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC32.5■■■□□ 2.79
Ube4aE9Q735 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC32.44■■■□□ 2.78
Ube4aE9Q735 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC32.43■■■□□ 2.78
Ube4aE9Q735 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC32.42■■■□□ 2.78
Ube4aE9Q735 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC32.41■■■□□ 2.78
Ube4aE9Q735 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC32.41■■■□□ 2.78
Ube4aE9Q735 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC32.41■■■□□ 2.78
Ube4aE9Q735 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC32.4■■■□□ 2.78
Ube4aE9Q735 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC32.4■■■□□ 2.78
Ube4aE9Q735 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC32.39■■■□□ 2.78
Ube4aE9Q735 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC32.37■■■□□ 2.77
Ube4aE9Q735 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC32.36■■■□□ 2.77
Ube4aE9Q735 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC32.35■■■□□ 2.77
Ube4aE9Q735 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC32.34■■■□□ 2.77
Ube4aE9Q735 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC32.33■■■□□ 2.77
Ube4aE9Q735 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC32.32■■■□□ 2.76
Ube4aE9Q735 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC32.31■■■□□ 2.76
Ube4aE9Q735 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC32.3■■■□□ 2.76
Ube4aE9Q735 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC32.29■■■□□ 2.76
Ube4aE9Q735 Tdp2-203ENSMUST00000223804 1136 ntBASIC32.28■■■□□ 2.76
Ube4aE9Q735 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC32.27■■■□□ 2.76
Ube4aE9Q735 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC32.26■■■□□ 2.75
Ube4aE9Q735 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC32.24■■■□□ 2.75
Ube4aE9Q735 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC32.2■■■□□ 2.75
Ube4aE9Q735 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC32.2■■■□□ 2.75
Ube4aE9Q735 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC32.19■■■□□ 2.74
Ube4aE9Q735 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC32.19■■■□□ 2.74
Ube4aE9Q735 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC32.17■■■□□ 2.74
Ube4aE9Q735 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC32.11■■■□□ 2.73
Ube4aE9Q735 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC32.1■■■□□ 2.73
Ube4aE9Q735 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC32.07■■■□□ 2.72
Ube4aE9Q735 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC32.07■■■□□ 2.72
Ube4aE9Q735 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC32.07■■■□□ 2.72
Ube4aE9Q735 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC32.05■■■□□ 2.72
Ube4aE9Q735 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC32.02■■■□□ 2.72
Ube4aE9Q735 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC32.01■■■□□ 2.72
Ube4aE9Q735 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC32.01■■■□□ 2.71
Ube4aE9Q735 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC31.99■■■□□ 2.71
Ube4aE9Q735 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC31.99■■■□□ 2.71
Ube4aE9Q735 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC31.97■■■□□ 2.71
Ube4aE9Q735 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC31.96■■■□□ 2.71
Ube4aE9Q735 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC31.96■■■□□ 2.71
Ube4aE9Q735 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC31.94■■■□□ 2.7
Ube4aE9Q735 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC31.94■■■□□ 2.7
Ube4aE9Q735 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC31.91■■■□□ 2.7
Ube4aE9Q735 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC31.89■■■□□ 2.7
Ube4aE9Q735 Gm45855-201ENSMUST00000212546 880 ntBASIC31.89■■■□□ 2.7
Ube4aE9Q735 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC31.89■■■□□ 2.7
Ube4aE9Q735 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC31.87■■■□□ 2.69
Ube4aE9Q735 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC31.87■■■□□ 2.69
Ube4aE9Q735 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC31.86■■■□□ 2.69
Ube4aE9Q735 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC31.85■■■□□ 2.69
Ube4aE9Q735 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC31.83■■■□□ 2.69
Ube4aE9Q735 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC31.83■■■□□ 2.69
Ube4aE9Q735 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC31.83■■■□□ 2.69
Ube4aE9Q735 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC31.83■■■□□ 2.69
Ube4aE9Q735 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC31.81■■■□□ 2.68
Ube4aE9Q735 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC31.81■■■□□ 2.68
Ube4aE9Q735 Gm9397-201ENSMUST00000200125 605 ntBASIC31.8■■■□□ 2.68
Ube4aE9Q735 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC31.79■■■□□ 2.68
Ube4aE9Q735 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC31.79■■■□□ 2.68
Ube4aE9Q735 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC31.79■■■□□ 2.68
Ube4aE9Q735 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC31.78■■■□□ 2.68
Ube4aE9Q735 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC31.78■■■□□ 2.68
Ube4aE9Q735 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC31.77■■■□□ 2.68
Ube4aE9Q735 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC31.76■■■□□ 2.68
Ube4aE9Q735 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC31.76■■■□□ 2.67
Ube4aE9Q735 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC31.76■■■□□ 2.67
Ube4aE9Q735 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC31.75■■■□□ 2.67
Ube4aE9Q735 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC31.73■■■□□ 2.67
Ube4aE9Q735 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC31.73■■■□□ 2.67
Ube4aE9Q735 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC31.72■■■□□ 2.67
Ube4aE9Q735 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC31.7■■■□□ 2.67
Ube4aE9Q735 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC31.7■■■□□ 2.66
Ube4aE9Q735 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC31.69■■■□□ 2.66
Ube4aE9Q735 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC31.68■■■□□ 2.66
Ube4aE9Q735 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC31.66■■■□□ 2.66
Ube4aE9Q735 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC31.66■■■□□ 2.66
Ube4aE9Q735 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC31.65■■■□□ 2.66
Ube4aE9Q735 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC31.65■■■□□ 2.66
Ube4aE9Q735 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC31.62■■■□□ 2.65
Ube4aE9Q735 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC31.6■■■□□ 2.65
Ube4aE9Q735 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC31.6■■■□□ 2.65
Ube4aE9Q735 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC31.59■■■□□ 2.65
Ube4aE9Q735 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC31.59■■■□□ 2.65
Ube4aE9Q735 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC31.59■■■□□ 2.65
Ube4aE9Q735 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC31.58■■■□□ 2.65
Ube4aE9Q735 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC31.58■■■□□ 2.65
Ube4aE9Q735 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC31.57■■■□□ 2.64
Ube4aE9Q735 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC31.56■■■□□ 2.64
Ube4aE9Q735 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC31.56■■■□□ 2.64
Ube4aE9Q735 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC31.53■■■□□ 2.64
Ube4aE9Q735 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC31.53■■■□□ 2.64
Ube4aE9Q735 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC31.53■■■□□ 2.64
Ube4aE9Q735 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC31.52■■■□□ 2.64
Ube4aE9Q735 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC31.51■■■□□ 2.63
Retrieved 100 of 76,532 protein–RNA pairs in 8.7 ms