Protein–RNA interactions for Protein: D3YU81

Rfx8, DNA-binding protein RFX8, mousemouse

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx8D3YU81 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC27.68■■■□□ 2.02
Rfx8D3YU81 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC27.67■■■□□ 2.02
Rfx8D3YU81 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC27.67■■■□□ 2.02
Rfx8D3YU81 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC27.66■■■□□ 2.02
Rfx8D3YU81 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC27.65■■■□□ 2.02
Rfx8D3YU81 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC27.64■■■□□ 2.02
Rfx8D3YU81 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC27.6■■■□□ 2.01
Rfx8D3YU81 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC27.58■■■□□ 2.01
Rfx8D3YU81 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC27.57■■■□□ 2
Rfx8D3YU81 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC27.56■■■□□ 2
Rfx8D3YU81 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC27.55■■■□□ 2
Rfx8D3YU81 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC27.55■■■□□ 2
Rfx8D3YU81 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC27.53■■■□□ 2
Rfx8D3YU81 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC27.53■■■□□ 2
Rfx8D3YU81 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC27.5■■□□□ 1.99
Rfx8D3YU81 Gm24804-201ENSMUST00000174982 85 ntBASIC27.5■■□□□ 1.99
Rfx8D3YU81 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC27.5■■□□□ 1.99
Rfx8D3YU81 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC27.5■■□□□ 1.99
Rfx8D3YU81 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC27.48■■□□□ 1.99
Rfx8D3YU81 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC27.48■■□□□ 1.99
Rfx8D3YU81 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC27.47■■□□□ 1.99
Rfx8D3YU81 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC27.46■■□□□ 1.99
Rfx8D3YU81 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC27.45■■□□□ 1.98
Rfx8D3YU81 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC27.44■■□□□ 1.98
Rfx8D3YU81 Gm2415-204ENSMUST00000190235 2004 ntBASIC27.44■■□□□ 1.98
Rfx8D3YU81 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC27.41■■□□□ 1.98
Rfx8D3YU81 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC27.41■■□□□ 1.98
Rfx8D3YU81 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC27.4■■□□□ 1.98
Rfx8D3YU81 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC27.38■■□□□ 1.97
Rfx8D3YU81 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC27.37■■□□□ 1.97
Rfx8D3YU81 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
Rfx8D3YU81 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
Rfx8D3YU81 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
Rfx8D3YU81 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
Rfx8D3YU81 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
Rfx8D3YU81 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC27.32■■□□□ 1.96
Rfx8D3YU81 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
Rfx8D3YU81 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
Rfx8D3YU81 Peli2-204ENSMUST00000226513 1320 ntBASIC27.3■■□□□ 1.96
Rfx8D3YU81 AC153504.1-201ENSMUST00000218379 2290 ntBASIC27.3■■□□□ 1.96
Rfx8D3YU81 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
Rfx8D3YU81 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC27.3■■□□□ 1.96
Rfx8D3YU81 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
Rfx8D3YU81 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC27.26■■□□□ 1.95
Rfx8D3YU81 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC27.26■■□□□ 1.95
Rfx8D3YU81 Gm6658-202ENSMUST00000209493 1885 ntBASIC27.25■■□□□ 1.95
Rfx8D3YU81 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC27.23■■□□□ 1.95
Rfx8D3YU81 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC27.22■■□□□ 1.95
Rfx8D3YU81 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC27.21■■□□□ 1.95
Rfx8D3YU81 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC27.21■■□□□ 1.95
Rfx8D3YU81 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC27.2■■□□□ 1.95
Rfx8D3YU81 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC27.2■■□□□ 1.94
Rfx8D3YU81 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC27.2■■□□□ 1.94
Rfx8D3YU81 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC27.2■■□□□ 1.94
Rfx8D3YU81 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
Rfx8D3YU81 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC27.18■■□□□ 1.94
Rfx8D3YU81 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
Rfx8D3YU81 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC27.16■■□□□ 1.94
Rfx8D3YU81 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC27.14■■□□□ 1.94
Rfx8D3YU81 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC27.13■■□□□ 1.93
Rfx8D3YU81 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
Rfx8D3YU81 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
Rfx8D3YU81 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC27.11■■□□□ 1.93
Rfx8D3YU81 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC27.11■■□□□ 1.93
Rfx8D3YU81 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC27.08■■□□□ 1.93
Rfx8D3YU81 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC27.07■■□□□ 1.92
Rfx8D3YU81 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC27.07■■□□□ 1.92
Rfx8D3YU81 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC27.06■■□□□ 1.92
Rfx8D3YU81 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC27.06■■□□□ 1.92
Rfx8D3YU81 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC27.06■■□□□ 1.92
Rfx8D3YU81 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC27.05■■□□□ 1.92
Rfx8D3YU81 Gm16148-201ENSMUST00000119653 893 ntBASIC27.04■■□□□ 1.92
Rfx8D3YU81 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC27.03■■□□□ 1.92
Rfx8D3YU81 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC27.02■■□□□ 1.92
Rfx8D3YU81 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC27.02■■□□□ 1.92
Rfx8D3YU81 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC27.01■■□□□ 1.91
Rfx8D3YU81 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC27■■□□□ 1.91
Rfx8D3YU81 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC26.99■■□□□ 1.91
Rfx8D3YU81 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC26.99■■□□□ 1.91
Rfx8D3YU81 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC26.98■■□□□ 1.91
Rfx8D3YU81 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC26.98■■□□□ 1.91
Rfx8D3YU81 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC26.96■■□□□ 1.91
Rfx8D3YU81 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC26.94■■□□□ 1.9
Rfx8D3YU81 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC26.94■■□□□ 1.9
Rfx8D3YU81 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC26.94■■□□□ 1.9
Rfx8D3YU81 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
Rfx8D3YU81 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC26.92■■□□□ 1.9
Rfx8D3YU81 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC26.92■■□□□ 1.9
Rfx8D3YU81 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC26.91■■□□□ 1.9
Rfx8D3YU81 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC26.91■■□□□ 1.9
Rfx8D3YU81 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC26.91■■□□□ 1.9
Rfx8D3YU81 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC26.91■■□□□ 1.9
Rfx8D3YU81 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC26.9■■□□□ 1.9
Rfx8D3YU81 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.9
Rfx8D3YU81 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC26.89■■□□□ 1.89
Rfx8D3YU81 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
Rfx8D3YU81 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC26.85■■□□□ 1.89
Rfx8D3YU81 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
Rfx8D3YU81 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC26.85■■□□□ 1.89
Rfx8D3YU81 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
Retrieved 100 of 76,532 protein–RNA pairs in 30.4 ms