Protein–RNA interactions for Protein: A2AN08

Ubr4, E3 ubiquitin-protein ligase UBR4, mousemouse

Predictions only

Length 5,180 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr4A2AN08 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Ubr4A2AN08 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ubr4A2AN08 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Ubr4A2AN08 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC14.99□□□□□ -0.01
Ubr4A2AN08 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Ubr4A2AN08 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ubr4A2AN08 Gm9939-201ENSMUST00000067161 1154 ntBASIC14.96□□□□□ -0.01
Ubr4A2AN08 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC14.94□□□□□ -0.02
Ubr4A2AN08 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Ubr4A2AN08 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC14.92□□□□□ -0.02
Ubr4A2AN08 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ubr4A2AN08 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC14.91□□□□□ -0.02
Ubr4A2AN08 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC14.89□□□□□ -0.03
Ubr4A2AN08 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Ubr4A2AN08 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
Ubr4A2AN08 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ubr4A2AN08 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
Ubr4A2AN08 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC14.88□□□□□ -0.03
Ubr4A2AN08 Gm6821-201ENSMUST00000107540 542 ntBASIC14.88□□□□□ -0.03
Ubr4A2AN08 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC14.87□□□□□ -0.03
Ubr4A2AN08 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ubr4A2AN08 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC14.86□□□□□ -0.03
Ubr4A2AN08 Mir6538-201ENSMUST00000183713 110 ntBASIC14.85□□□□□ -0.03
Ubr4A2AN08 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ubr4A2AN08 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ubr4A2AN08 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ubr4A2AN08 Peli2-204ENSMUST00000226513 1320 ntBASIC14.83□□□□□ -0.03
Ubr4A2AN08 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ubr4A2AN08 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Ubr4A2AN08 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
Ubr4A2AN08 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Ubr4A2AN08 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Ubr4A2AN08 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC14.78□□□□□ -0.04
Ubr4A2AN08 Gm5297-201ENSMUST00000198555 1171 ntBASIC14.78□□□□□ -0.04
Ubr4A2AN08 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC14.77□□□□□ -0.05
Ubr4A2AN08 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ubr4A2AN08 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ubr4A2AN08 Gm24970-201ENSMUST00000175582 82 ntBASIC14.74□□□□□ -0.05
Ubr4A2AN08 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Ubr4A2AN08 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC14.74□□□□□ -0.05
Ubr4A2AN08 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC14.73□□□□□ -0.05
Ubr4A2AN08 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC14.72□□□□□ -0.05
Ubr4A2AN08 AL845457.1-201ENSMUST00000197244 68 ntBASIC14.72□□□□□ -0.05
Ubr4A2AN08 Gm11175-201ENSMUST00000116172 543 ntBASIC14.69□□□□□ -0.06
Ubr4A2AN08 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
Ubr4A2AN08 Cap2-205ENSMUST00000225824 1634 ntBASIC14.69□□□□□ -0.06
Ubr4A2AN08 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Ubr4A2AN08 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ubr4A2AN08 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Ubr4A2AN08 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC14.65□□□□□ -0.06
Ubr4A2AN08 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Ubr4A2AN08 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Ubr4A2AN08 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Ubr4A2AN08 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Ubr4A2AN08 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Ubr4A2AN08 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC14.62□□□□□ -0.07
Ubr4A2AN08 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ubr4A2AN08 Gm22567-201ENSMUST00000175542 342 ntBASIC14.62□□□□□ -0.07
Ubr4A2AN08 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Ubr4A2AN08 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
Ubr4A2AN08 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC14.59□□□□□ -0.07
Ubr4A2AN08 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Ubr4A2AN08 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC14.58□□□□□ -0.08
Ubr4A2AN08 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Ubr4A2AN08 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Ubr4A2AN08 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Ubr4A2AN08 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Ubr4A2AN08 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC14.53□□□□□ -0.08
Ubr4A2AN08 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Ubr4A2AN08 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ubr4A2AN08 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Ubr4A2AN08 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.08
Ubr4A2AN08 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Ubr4A2AN08 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Ubr4A2AN08 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
Ubr4A2AN08 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Ubr4A2AN08 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC14.49□□□□□ -0.09
Ubr4A2AN08 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
Ubr4A2AN08 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Ubr4A2AN08 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Ubr4A2AN08 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ubr4A2AN08 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC14.47□□□□□ -0.09
Ubr4A2AN08 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ubr4A2AN08 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Ubr4A2AN08 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC14.46□□□□□ -0.09
Ubr4A2AN08 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Ubr4A2AN08 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ubr4A2AN08 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC14.45□□□□□ -0.1
Ubr4A2AN08 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ubr4A2AN08 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC14.44□□□□□ -0.1
Ubr4A2AN08 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ubr4A2AN08 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Ubr4A2AN08 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Ubr4A2AN08 Gm7432-201ENSMUST00000210343 879 ntBASIC14.41□□□□□ -0.1
Ubr4A2AN08 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC14.41□□□□□ -0.1
Ubr4A2AN08 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
Ubr4A2AN08 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC14.4□□□□□ -0.1
Ubr4A2AN08 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Ubr4A2AN08 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Ubr4A2AN08 Serp2-204ENSMUST00000228055 705 ntBASIC14.39□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 57.8 ms