Protein–RNA interactions for Protein: A0A0B4J1J0

Igkv4-50, Immunoglobulin kappa variable 4-50 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv4-50A0A0B4J1J0 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC22.08■■□□□ 1.12
Igkv4-50A0A0B4J1J0 Gm27322-201ENSMUST00000184007 104 ntBASIC22.06■■□□□ 1.12
Igkv4-50A0A0B4J1J0 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Igkv4-50A0A0B4J1J0 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC22.06■■□□□ 1.12
Igkv4-50A0A0B4J1J0 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Igkv4-50A0A0B4J1J0 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC22.05■■□□□ 1.12
Igkv4-50A0A0B4J1J0 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Igkv4-50A0A0B4J1J0 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC22.03■■□□□ 1.12
Igkv4-50A0A0B4J1J0 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC22.01■■□□□ 1.11
Igkv4-50A0A0B4J1J0 AC166822.3-201ENSMUST00000227394 661 ntBASIC22■■□□□ 1.11
Igkv4-50A0A0B4J1J0 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
Igkv4-50A0A0B4J1J0 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Igkv4-50A0A0B4J1J0 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Igkv4-50A0A0B4J1J0 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC21.93■■□□□ 1.1
Igkv4-50A0A0B4J1J0 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
Igkv4-50A0A0B4J1J0 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
Igkv4-50A0A0B4J1J0 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Igkv4-50A0A0B4J1J0 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC21.91■■□□□ 1.1
Igkv4-50A0A0B4J1J0 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Igkv4-50A0A0B4J1J0 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC21.89■■□□□ 1.1
Igkv4-50A0A0B4J1J0 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
Igkv4-50A0A0B4J1J0 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC21.87■■□□□ 1.09
Igkv4-50A0A0B4J1J0 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Igkv4-50A0A0B4J1J0 AC153504.1-201ENSMUST00000218379 2290 ntBASIC21.87■■□□□ 1.09
Igkv4-50A0A0B4J1J0 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC21.86■■□□□ 1.09
Igkv4-50A0A0B4J1J0 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Igkv4-50A0A0B4J1J0 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Igkv4-50A0A0B4J1J0 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
Igkv4-50A0A0B4J1J0 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
Igkv4-50A0A0B4J1J0 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Igkv4-50A0A0B4J1J0 Gm26115-201ENSMUST00000175605 87 ntBASIC21.82■■□□□ 1.08
Igkv4-50A0A0B4J1J0 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC21.82■■□□□ 1.08
Igkv4-50A0A0B4J1J0 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Igkv4-50A0A0B4J1J0 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Igkv4-50A0A0B4J1J0 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC21.8■■□□□ 1.08
Igkv4-50A0A0B4J1J0 Gm8109-201ENSMUST00000194076 746 ntBASIC21.8■■□□□ 1.08
Igkv4-50A0A0B4J1J0 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC21.79■■□□□ 1.08
Igkv4-50A0A0B4J1J0 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC21.79■■□□□ 1.08
Igkv4-50A0A0B4J1J0 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
Igkv4-50A0A0B4J1J0 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Igkv4-50A0A0B4J1J0 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Igkv4-50A0A0B4J1J0 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Igkv4-50A0A0B4J1J0 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Igkv4-50A0A0B4J1J0 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC21.75■■□□□ 1.07
Igkv4-50A0A0B4J1J0 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Igkv4-50A0A0B4J1J0 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
Igkv4-50A0A0B4J1J0 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Igkv4-50A0A0B4J1J0 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Igkv4-50A0A0B4J1J0 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Igkv4-50A0A0B4J1J0 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Igkv4-50A0A0B4J1J0 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC21.72■■□□□ 1.07
Igkv4-50A0A0B4J1J0 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Igkv4-50A0A0B4J1J0 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
Igkv4-50A0A0B4J1J0 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Igkv4-50A0A0B4J1J0 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Igkv4-50A0A0B4J1J0 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Igkv4-50A0A0B4J1J0 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Igkv4-50A0A0B4J1J0 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
Igkv4-50A0A0B4J1J0 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Igkv4-50A0A0B4J1J0 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Igkv4-50A0A0B4J1J0 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC21.63■■□□□ 1.05
Igkv4-50A0A0B4J1J0 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Igkv4-50A0A0B4J1J0 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC21.62■■□□□ 1.05
Igkv4-50A0A0B4J1J0 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC21.62■■□□□ 1.05
Igkv4-50A0A0B4J1J0 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Igkv4-50A0A0B4J1J0 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Igkv4-50A0A0B4J1J0 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC21.6■■□□□ 1.05
Igkv4-50A0A0B4J1J0 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Igkv4-50A0A0B4J1J0 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Igkv4-50A0A0B4J1J0 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC21.55■■□□□ 1.04
Igkv4-50A0A0B4J1J0 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Igkv4-50A0A0B4J1J0 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Igkv4-50A0A0B4J1J0 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC21.54■■□□□ 1.04
Igkv4-50A0A0B4J1J0 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Igkv4-50A0A0B4J1J0 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Igkv4-50A0A0B4J1J0 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Igkv4-50A0A0B4J1J0 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC21.53■■□□□ 1.04
Igkv4-50A0A0B4J1J0 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC21.52■■□□□ 1.04
Igkv4-50A0A0B4J1J0 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
Igkv4-50A0A0B4J1J0 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
Igkv4-50A0A0B4J1J0 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC21.51■■□□□ 1.03
Igkv4-50A0A0B4J1J0 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Igkv4-50A0A0B4J1J0 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Igkv4-50A0A0B4J1J0 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Igkv4-50A0A0B4J1J0 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Igkv4-50A0A0B4J1J0 Peli2-204ENSMUST00000226513 1320 ntBASIC21.5■■□□□ 1.03
Igkv4-50A0A0B4J1J0 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Igkv4-50A0A0B4J1J0 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC21.49■■□□□ 1.03
Igkv4-50A0A0B4J1J0 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC21.49■■□□□ 1.03
Igkv4-50A0A0B4J1J0 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Igkv4-50A0A0B4J1J0 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Igkv4-50A0A0B4J1J0 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
Igkv4-50A0A0B4J1J0 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Igkv4-50A0A0B4J1J0 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC21.46■■□□□ 1.03
Igkv4-50A0A0B4J1J0 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Igkv4-50A0A0B4J1J0 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC21.45■■□□□ 1.02
Igkv4-50A0A0B4J1J0 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Igkv4-50A0A0B4J1J0 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Igkv4-50A0A0B4J1J0 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC21.43■■□□□ 1.02
Igkv4-50A0A0B4J1J0 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC21.41■■□□□ 1.02
Retrieved 100 of 76,532 protein–RNA pairs in 60.9 ms