Protein–RNA interactions for Protein: A0A0A6YY41

Ighv1-47, Immunoglobulin heavy variable 1-47 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-47A0A0A6YY41 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Ighv1-47A0A0A6YY41 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC21.49■■□□□ 1.03
Ighv1-47A0A0A6YY41 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Ighv1-47A0A0A6YY41 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC21.49■■□□□ 1.03
Ighv1-47A0A0A6YY41 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC21.48■■□□□ 1.03
Ighv1-47A0A0A6YY41 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC21.47■■□□□ 1.03
Ighv1-47A0A0A6YY41 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
Ighv1-47A0A0A6YY41 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Ighv1-47A0A0A6YY41 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Ighv1-47A0A0A6YY41 Gm17082-201ENSMUST00000166043 1091 ntBASIC21.39■■□□□ 1.01
Ighv1-47A0A0A6YY41 Gm9905-201ENSMUST00000065740 1845 ntBASIC21.38■■□□□ 1.01
Ighv1-47A0A0A6YY41 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Ighv1-47A0A0A6YY41 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC21.38■■□□□ 1.01
Ighv1-47A0A0A6YY41 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC21.37■■□□□ 1.01
Ighv1-47A0A0A6YY41 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Ighv1-47A0A0A6YY41 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC21.36■■□□□ 1.01
Ighv1-47A0A0A6YY41 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Ighv1-47A0A0A6YY41 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC21.35■■□□□ 1.01
Ighv1-47A0A0A6YY41 Gm27322-201ENSMUST00000184007 104 ntBASIC21.35■■□□□ 1.01
Ighv1-47A0A0A6YY41 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC21.35■■□□□ 1.01
Ighv1-47A0A0A6YY41 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Ighv1-47A0A0A6YY41 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC21.33■■□□□ 1.01
Ighv1-47A0A0A6YY41 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Ighv1-47A0A0A6YY41 Mipep-204ENSMUST00000225043 1548 ntBASIC21.31■■□□□ 1
Ighv1-47A0A0A6YY41 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Ighv1-47A0A0A6YY41 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC21.3■■□□□ 1
Ighv1-47A0A0A6YY41 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Ighv1-47A0A0A6YY41 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
Ighv1-47A0A0A6YY41 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC21.28■■□□□ 1
Ighv1-47A0A0A6YY41 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
Ighv1-47A0A0A6YY41 Gm26115-201ENSMUST00000175605 87 ntBASIC21.28■■□□□ 1
Ighv1-47A0A0A6YY41 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC21.27■□□□□ 0.99
Ighv1-47A0A0A6YY41 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
Ighv1-47A0A0A6YY41 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
Ighv1-47A0A0A6YY41 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
Ighv1-47A0A0A6YY41 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Ighv1-47A0A0A6YY41 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Ighv1-47A0A0A6YY41 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Ighv1-47A0A0A6YY41 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Ighv1-47A0A0A6YY41 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Ighv1-47A0A0A6YY41 Gm6206-201ENSMUST00000133472 2199 ntBASIC21.22■□□□□ 0.99
Ighv1-47A0A0A6YY41 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC21.21■□□□□ 0.99
Ighv1-47A0A0A6YY41 AC166822.3-201ENSMUST00000227394 661 ntBASIC21.21■□□□□ 0.99
Ighv1-47A0A0A6YY41 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Ighv1-47A0A0A6YY41 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Ighv1-47A0A0A6YY41 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Ighv1-47A0A0A6YY41 Gm8109-201ENSMUST00000194076 746 ntBASIC21.19■□□□□ 0.98
Ighv1-47A0A0A6YY41 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC21.15■□□□□ 0.98
Ighv1-47A0A0A6YY41 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
Ighv1-47A0A0A6YY41 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
Ighv1-47A0A0A6YY41 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Ighv1-47A0A0A6YY41 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC21.11■□□□□ 0.97
Ighv1-47A0A0A6YY41 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Ighv1-47A0A0A6YY41 Zxda-201ENSMUST00000117281 2621 ntBASIC21.09■□□□□ 0.97
Ighv1-47A0A0A6YY41 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Ighv1-47A0A0A6YY41 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Ighv1-47A0A0A6YY41 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Ighv1-47A0A0A6YY41 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
Ighv1-47A0A0A6YY41 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Ighv1-47A0A0A6YY41 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Ighv1-47A0A0A6YY41 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Ighv1-47A0A0A6YY41 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Ighv1-47A0A0A6YY41 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Ighv1-47A0A0A6YY41 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Ighv1-47A0A0A6YY41 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Ighv1-47A0A0A6YY41 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Ighv1-47A0A0A6YY41 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Ighv1-47A0A0A6YY41 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Ighv1-47A0A0A6YY41 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Ighv1-47A0A0A6YY41 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Ighv1-47A0A0A6YY41 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Ighv1-47A0A0A6YY41 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
Ighv1-47A0A0A6YY41 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
Ighv1-47A0A0A6YY41 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Ighv1-47A0A0A6YY41 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
Ighv1-47A0A0A6YY41 Gm43445-201ENSMUST00000198564 2091 ntBASIC20.97■□□□□ 0.95
Ighv1-47A0A0A6YY41 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Ighv1-47A0A0A6YY41 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Ighv1-47A0A0A6YY41 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Ighv1-47A0A0A6YY41 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Ighv1-47A0A0A6YY41 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Ighv1-47A0A0A6YY41 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Ighv1-47A0A0A6YY41 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
Ighv1-47A0A0A6YY41 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Ighv1-47A0A0A6YY41 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Ighv1-47A0A0A6YY41 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Ighv1-47A0A0A6YY41 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Ighv1-47A0A0A6YY41 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Ighv1-47A0A0A6YY41 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Ighv1-47A0A0A6YY41 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Ighv1-47A0A0A6YY41 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC20.9■□□□□ 0.94
Ighv1-47A0A0A6YY41 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC20.89■□□□□ 0.94
Ighv1-47A0A0A6YY41 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Ighv1-47A0A0A6YY41 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Ighv1-47A0A0A6YY41 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Ighv1-47A0A0A6YY41 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Ighv1-47A0A0A6YY41 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Ighv1-47A0A0A6YY41 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Ighv1-47A0A0A6YY41 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Ighv1-47A0A0A6YY41 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Retrieved 100 of 76,532 protein–RNA pairs in 13.8 ms