Protein–RNA interactions for Protein: A0A075B6C4

Trav21-dv12, T cell receptor alpha variable 21-DV12 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav21-dv12A0A075B6C4 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC19.88■□□□□ 0.77
Trav21-dv12A0A075B6C4 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC19.86■□□□□ 0.77
Trav21-dv12A0A075B6C4 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Trav21-dv12A0A075B6C4 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC19.83■□□□□ 0.77
Trav21-dv12A0A075B6C4 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
Trav21-dv12A0A075B6C4 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
Trav21-dv12A0A075B6C4 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC19.83■□□□□ 0.77
Trav21-dv12A0A075B6C4 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
Trav21-dv12A0A075B6C4 Gm17082-201ENSMUST00000166043 1091 ntBASIC19.81■□□□□ 0.76
Trav21-dv12A0A075B6C4 Gm27322-201ENSMUST00000184007 104 ntBASIC19.81■□□□□ 0.76
Trav21-dv12A0A075B6C4 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Trav21-dv12A0A075B6C4 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Trav21-dv12A0A075B6C4 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Trav21-dv12A0A075B6C4 AC153504.1-201ENSMUST00000218379 2290 ntBASIC19.78■□□□□ 0.76
Trav21-dv12A0A075B6C4 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Trav21-dv12A0A075B6C4 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Trav21-dv12A0A075B6C4 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Trav21-dv12A0A075B6C4 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
Trav21-dv12A0A075B6C4 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC19.74■□□□□ 0.75
Trav21-dv12A0A075B6C4 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC19.73■□□□□ 0.75
Trav21-dv12A0A075B6C4 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC19.73■□□□□ 0.75
Trav21-dv12A0A075B6C4 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC19.72■□□□□ 0.75
Trav21-dv12A0A075B6C4 AC166822.3-201ENSMUST00000227394 661 ntBASIC19.72■□□□□ 0.75
Trav21-dv12A0A075B6C4 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Trav21-dv12A0A075B6C4 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Trav21-dv12A0A075B6C4 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Trav21-dv12A0A075B6C4 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Trav21-dv12A0A075B6C4 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Trav21-dv12A0A075B6C4 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
Trav21-dv12A0A075B6C4 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Trav21-dv12A0A075B6C4 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Trav21-dv12A0A075B6C4 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Trav21-dv12A0A075B6C4 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Trav21-dv12A0A075B6C4 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Trav21-dv12A0A075B6C4 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Trav21-dv12A0A075B6C4 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Trav21-dv12A0A075B6C4 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Trav21-dv12A0A075B6C4 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
Trav21-dv12A0A075B6C4 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Trav21-dv12A0A075B6C4 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
Trav21-dv12A0A075B6C4 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Trav21-dv12A0A075B6C4 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Trav21-dv12A0A075B6C4 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC19.61■□□□□ 0.73
Trav21-dv12A0A075B6C4 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC19.6■□□□□ 0.73
Trav21-dv12A0A075B6C4 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
Trav21-dv12A0A075B6C4 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC19.6■□□□□ 0.73
Trav21-dv12A0A075B6C4 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Trav21-dv12A0A075B6C4 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC19.59■□□□□ 0.73
Trav21-dv12A0A075B6C4 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
Trav21-dv12A0A075B6C4 Gm26115-201ENSMUST00000175605 87 ntBASIC19.58■□□□□ 0.72
Trav21-dv12A0A075B6C4 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Trav21-dv12A0A075B6C4 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
Trav21-dv12A0A075B6C4 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Trav21-dv12A0A075B6C4 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Trav21-dv12A0A075B6C4 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Trav21-dv12A0A075B6C4 Gm8109-201ENSMUST00000194076 746 ntBASIC19.55■□□□□ 0.72
Trav21-dv12A0A075B6C4 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Trav21-dv12A0A075B6C4 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Trav21-dv12A0A075B6C4 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Trav21-dv12A0A075B6C4 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
Trav21-dv12A0A075B6C4 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Trav21-dv12A0A075B6C4 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Trav21-dv12A0A075B6C4 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Trav21-dv12A0A075B6C4 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Trav21-dv12A0A075B6C4 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Trav21-dv12A0A075B6C4 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Trav21-dv12A0A075B6C4 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Trav21-dv12A0A075B6C4 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Trav21-dv12A0A075B6C4 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Trav21-dv12A0A075B6C4 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Trav21-dv12A0A075B6C4 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Trav21-dv12A0A075B6C4 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Trav21-dv12A0A075B6C4 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Trav21-dv12A0A075B6C4 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Trav21-dv12A0A075B6C4 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
Trav21-dv12A0A075B6C4 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Trav21-dv12A0A075B6C4 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Trav21-dv12A0A075B6C4 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Trav21-dv12A0A075B6C4 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC19.41■□□□□ 0.7
Trav21-dv12A0A075B6C4 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Trav21-dv12A0A075B6C4 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
Trav21-dv12A0A075B6C4 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Trav21-dv12A0A075B6C4 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Trav21-dv12A0A075B6C4 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
Trav21-dv12A0A075B6C4 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
Trav21-dv12A0A075B6C4 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
Trav21-dv12A0A075B6C4 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC19.38■□□□□ 0.69
Trav21-dv12A0A075B6C4 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
Trav21-dv12A0A075B6C4 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Trav21-dv12A0A075B6C4 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Trav21-dv12A0A075B6C4 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Trav21-dv12A0A075B6C4 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Trav21-dv12A0A075B6C4 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Trav21-dv12A0A075B6C4 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Trav21-dv12A0A075B6C4 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
Trav21-dv12A0A075B6C4 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Trav21-dv12A0A075B6C4 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
Trav21-dv12A0A075B6C4 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Trav21-dv12A0A075B6C4 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Trav21-dv12A0A075B6C4 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 55.8 ms