Protein–RNA interactions for Protein: A0A075B601

Trav9-1, T cell receptor alpha variable 9-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9-1A0A075B601 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Trav9-1A0A075B601 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.83
Trav9-1A0A075B601 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.83
Trav9-1A0A075B601 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Trav9-1A0A075B601 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Trav9-1A0A075B601 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Trav9-1A0A075B601 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Trav9-1A0A075B601 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Trav9-1A0A075B601 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC20.19■□□□□ 0.82
Trav9-1A0A075B601 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Trav9-1A0A075B601 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC20.18■□□□□ 0.82
Trav9-1A0A075B601 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Trav9-1A0A075B601 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Trav9-1A0A075B601 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Trav9-1A0A075B601 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Trav9-1A0A075B601 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC20.11■□□□□ 0.81
Trav9-1A0A075B601 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC20.11■□□□□ 0.81
Trav9-1A0A075B601 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
Trav9-1A0A075B601 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
Trav9-1A0A075B601 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Trav9-1A0A075B601 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Trav9-1A0A075B601 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Trav9-1A0A075B601 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Trav9-1A0A075B601 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Trav9-1A0A075B601 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Trav9-1A0A075B601 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
Trav9-1A0A075B601 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Trav9-1A0A075B601 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC20.08■□□□□ 0.81
Trav9-1A0A075B601 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC20.08■□□□□ 0.81
Trav9-1A0A075B601 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Trav9-1A0A075B601 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
Trav9-1A0A075B601 Gm17082-201ENSMUST00000166043 1091 ntBASIC20.05■□□□□ 0.8
Trav9-1A0A075B601 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
Trav9-1A0A075B601 Gm27322-201ENSMUST00000184007 104 ntBASIC20.02■□□□□ 0.8
Trav9-1A0A075B601 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC20.02■□□□□ 0.8
Trav9-1A0A075B601 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Trav9-1A0A075B601 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC20.01■□□□□ 0.79
Trav9-1A0A075B601 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Trav9-1A0A075B601 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
Trav9-1A0A075B601 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC19.99■□□□□ 0.79
Trav9-1A0A075B601 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Trav9-1A0A075B601 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Trav9-1A0A075B601 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Trav9-1A0A075B601 AC166822.3-201ENSMUST00000227394 661 ntBASIC19.97■□□□□ 0.79
Trav9-1A0A075B601 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC19.97■□□□□ 0.79
Trav9-1A0A075B601 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Trav9-1A0A075B601 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Trav9-1A0A075B601 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Trav9-1A0A075B601 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Trav9-1A0A075B601 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Trav9-1A0A075B601 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Trav9-1A0A075B601 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
Trav9-1A0A075B601 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Trav9-1A0A075B601 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC19.93■□□□□ 0.78
Trav9-1A0A075B601 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC19.93■□□□□ 0.78
Trav9-1A0A075B601 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Trav9-1A0A075B601 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Trav9-1A0A075B601 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Trav9-1A0A075B601 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Trav9-1A0A075B601 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
Trav9-1A0A075B601 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC19.89■□□□□ 0.77
Trav9-1A0A075B601 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
Trav9-1A0A075B601 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Trav9-1A0A075B601 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Trav9-1A0A075B601 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Trav9-1A0A075B601 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Trav9-1A0A075B601 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Trav9-1A0A075B601 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
Trav9-1A0A075B601 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Trav9-1A0A075B601 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Trav9-1A0A075B601 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Trav9-1A0A075B601 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Trav9-1A0A075B601 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
Trav9-1A0A075B601 Gm6206-201ENSMUST00000133472 2199 ntBASIC19.81■□□□□ 0.76
Trav9-1A0A075B601 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Trav9-1A0A075B601 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
Trav9-1A0A075B601 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Trav9-1A0A075B601 Zxda-201ENSMUST00000117281 2621 ntBASIC19.78■□□□□ 0.76
Trav9-1A0A075B601 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
Trav9-1A0A075B601 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Trav9-1A0A075B601 Gm8109-201ENSMUST00000194076 746 ntBASIC19.75■□□□□ 0.75
Trav9-1A0A075B601 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Trav9-1A0A075B601 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Trav9-1A0A075B601 Gm26115-201ENSMUST00000175605 87 ntBASIC19.74■□□□□ 0.75
Trav9-1A0A075B601 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
Trav9-1A0A075B601 Gm9905-201ENSMUST00000065740 1845 ntBASIC19.73■□□□□ 0.75
Trav9-1A0A075B601 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Trav9-1A0A075B601 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Trav9-1A0A075B601 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Trav9-1A0A075B601 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Trav9-1A0A075B601 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
Trav9-1A0A075B601 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Trav9-1A0A075B601 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Trav9-1A0A075B601 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Trav9-1A0A075B601 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Trav9-1A0A075B601 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
Trav9-1A0A075B601 Gm43445-201ENSMUST00000198564 2091 ntBASIC19.67■□□□□ 0.74
Trav9-1A0A075B601 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Trav9-1A0A075B601 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Trav9-1A0A075B601 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 95.9 ms