Protein–RNA interactions for Protein: Q8K4J2

Ebf4, Transcription factor COE4, mousemouse

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf4Q8K4J2 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ebf4Q8K4J2 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Ebf4Q8K4J2 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Ebf4Q8K4J2 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Ebf4Q8K4J2 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Ebf4Q8K4J2 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Ebf4Q8K4J2 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.53
Ebf4Q8K4J2 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Ebf4Q8K4J2 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Ebf4Q8K4J2 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC18.33■□□□□ 0.52
Ebf4Q8K4J2 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC18.33■□□□□ 0.52
Ebf4Q8K4J2 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
Ebf4Q8K4J2 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Ebf4Q8K4J2 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Ebf4Q8K4J2 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC18.33■□□□□ 0.52
Ebf4Q8K4J2 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Ebf4Q8K4J2 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ebf4Q8K4J2 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ebf4Q8K4J2 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ebf4Q8K4J2 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC18.32■□□□□ 0.52
Ebf4Q8K4J2 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ebf4Q8K4J2 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Ebf4Q8K4J2 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ebf4Q8K4J2 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ebf4Q8K4J2 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ebf4Q8K4J2 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ebf4Q8K4J2 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Ebf4Q8K4J2 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC18.32■□□□□ 0.52
Ebf4Q8K4J2 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Ebf4Q8K4J2 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Ebf4Q8K4J2 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
Ebf4Q8K4J2 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC18.31■□□□□ 0.52
Ebf4Q8K4J2 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Ebf4Q8K4J2 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Ebf4Q8K4J2 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Ebf4Q8K4J2 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Ebf4Q8K4J2 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
Ebf4Q8K4J2 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Ebf4Q8K4J2 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Ebf4Q8K4J2 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ebf4Q8K4J2 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ebf4Q8K4J2 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Ebf4Q8K4J2 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ebf4Q8K4J2 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ebf4Q8K4J2 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ebf4Q8K4J2 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC18.3■□□□□ 0.52
Ebf4Q8K4J2 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ebf4Q8K4J2 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
Ebf4Q8K4J2 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ebf4Q8K4J2 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ebf4Q8K4J2 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ebf4Q8K4J2 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC18.29■□□□□ 0.52
Ebf4Q8K4J2 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Ebf4Q8K4J2 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Ebf4Q8K4J2 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ebf4Q8K4J2 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
Ebf4Q8K4J2 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ebf4Q8K4J2 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Ebf4Q8K4J2 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Ebf4Q8K4J2 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Ebf4Q8K4J2 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ebf4Q8K4J2 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ebf4Q8K4J2 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ebf4Q8K4J2 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC18.28■□□□□ 0.52
Ebf4Q8K4J2 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
Ebf4Q8K4J2 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
Ebf4Q8K4J2 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
Ebf4Q8K4J2 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
Ebf4Q8K4J2 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Ebf4Q8K4J2 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Ebf4Q8K4J2 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
Ebf4Q8K4J2 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC18.27■□□□□ 0.52
Ebf4Q8K4J2 Fam105a-203ENSMUST00000226170 3043 ntBASIC18.27■□□□□ 0.52
Ebf4Q8K4J2 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Ebf4Q8K4J2 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Ebf4Q8K4J2 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Ebf4Q8K4J2 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Ebf4Q8K4J2 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Ebf4Q8K4J2 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
Ebf4Q8K4J2 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Ebf4Q8K4J2 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Ebf4Q8K4J2 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Ebf4Q8K4J2 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ebf4Q8K4J2 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ebf4Q8K4J2 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ebf4Q8K4J2 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC18.26■□□□□ 0.51
Ebf4Q8K4J2 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ebf4Q8K4J2 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ebf4Q8K4J2 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Ebf4Q8K4J2 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ebf4Q8K4J2 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ebf4Q8K4J2 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC18.25■□□□□ 0.51
Ebf4Q8K4J2 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Ebf4Q8K4J2 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Ebf4Q8K4J2 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Ebf4Q8K4J2 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Ebf4Q8K4J2 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Ebf4Q8K4J2 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Ebf4Q8K4J2 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Ebf4Q8K4J2 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 98.2 ms