Protein–RNA interactions for Protein: Q8VDP2

UPF0428 protein CXorf56 homolog, mousemouse

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q8VDP2 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Q8VDP2 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
Q8VDP2 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Q8VDP2 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
Q8VDP2 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Q8VDP2 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Q8VDP2 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
Q8VDP2 Gm11599-201ENSMUST00000118720 878 ntBASIC19.61■□□□□ 0.73
Q8VDP2 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC19.61■□□□□ 0.73
Q8VDP2 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC19.61■□□□□ 0.73
Q8VDP2 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Q8VDP2 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Q8VDP2 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Q8VDP2 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Q8VDP2 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC19.61■□□□□ 0.73
Q8VDP2 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Q8VDP2 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Q8VDP2 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Q8VDP2 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
Q8VDP2 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Q8VDP2 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Q8VDP2 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Q8VDP2 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC19.6■□□□□ 0.73
Q8VDP2 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC19.6■□□□□ 0.73
Q8VDP2 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Q8VDP2 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Q8VDP2 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Q8VDP2 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Q8VDP2 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
Q8VDP2 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
Q8VDP2 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
Q8VDP2 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC19.59■□□□□ 0.73
Q8VDP2 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Q8VDP2 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Q8VDP2 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Q8VDP2 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Q8VDP2 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC19.59■□□□□ 0.73
Q8VDP2 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
Q8VDP2 Gm4419-202ENSMUST00000226239 1431 ntBASIC19.59■□□□□ 0.73
Q8VDP2 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Q8VDP2 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
Q8VDP2 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Q8VDP2 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Q8VDP2 Gm22567-201ENSMUST00000175542 342 ntBASIC19.58■□□□□ 0.72
Q8VDP2 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC19.58■□□□□ 0.72
Q8VDP2 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
Q8VDP2 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Q8VDP2 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC19.58■□□□□ 0.72
Q8VDP2 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Q8VDP2 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Q8VDP2 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Q8VDP2 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Q8VDP2 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC19.57■□□□□ 0.72
Q8VDP2 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Q8VDP2 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC19.57■□□□□ 0.72
Q8VDP2 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Q8VDP2 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC19.57■□□□□ 0.72
Q8VDP2 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Q8VDP2 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Q8VDP2 Gm43403-201ENSMUST00000198011 1786 ntBASIC19.57■□□□□ 0.72
Q8VDP2 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Q8VDP2 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Q8VDP2 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC19.56■□□□□ 0.72
Q8VDP2 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Q8VDP2 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Q8VDP2 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Q8VDP2 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Q8VDP2 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC19.55■□□□□ 0.72
Q8VDP2 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC19.55■□□□□ 0.72
Q8VDP2 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC19.55■□□□□ 0.72
Q8VDP2 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Q8VDP2 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Q8VDP2 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Q8VDP2 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Q8VDP2 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Q8VDP2 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Q8VDP2 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC19.54■□□□□ 0.72
Q8VDP2 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC19.54■□□□□ 0.72
Q8VDP2 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Q8VDP2 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Q8VDP2 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Q8VDP2 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Q8VDP2 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
Q8VDP2 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Q8VDP2 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Q8VDP2 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Q8VDP2 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
Q8VDP2 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Q8VDP2 Gm37035-201ENSMUST00000194809 2148 ntBASIC19.53■□□□□ 0.72
Q8VDP2 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Q8VDP2 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Q8VDP2 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Q8VDP2 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC19.53■□□□□ 0.72
Q8VDP2 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Q8VDP2 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Q8VDP2 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Q8VDP2 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
Q8VDP2 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Q8VDP2 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Q8VDP2 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 18 ms