Protein–RNA interactions for Protein: Q80SX8

Pif1, ATP-dependent DNA helicase PIF1, mousemouse

Predictions only

Length 650 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pif1Q80SX8 Spcs1-204ENSMUST00000226782 949 ntBASIC18.64■□□□□ 0.57
Pif1Q80SX8 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Pif1Q80SX8 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Pif1Q80SX8 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Pif1Q80SX8 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Pif1Q80SX8 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
Pif1Q80SX8 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Pif1Q80SX8 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Pif1Q80SX8 Dmtn-209ENSMUST00000228295 2572 ntBASIC18.63■□□□□ 0.57
Pif1Q80SX8 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Pif1Q80SX8 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Pif1Q80SX8 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Pif1Q80SX8 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
Pif1Q80SX8 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Pif1Q80SX8 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Pif1Q80SX8 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
Pif1Q80SX8 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
Pif1Q80SX8 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Pif1Q80SX8 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC18.63■□□□□ 0.57
Pif1Q80SX8 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Pif1Q80SX8 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Pif1Q80SX8 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Pif1Q80SX8 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC18.62■□□□□ 0.57
Pif1Q80SX8 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Pif1Q80SX8 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC18.62■□□□□ 0.57
Pif1Q80SX8 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Pif1Q80SX8 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Pif1Q80SX8 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Pif1Q80SX8 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Pif1Q80SX8 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Pif1Q80SX8 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Pif1Q80SX8 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Pif1Q80SX8 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Pif1Q80SX8 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Pif1Q80SX8 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Pif1Q80SX8 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC18.61■□□□□ 0.57
Pif1Q80SX8 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Pif1Q80SX8 Gm29257-201ENSMUST00000186115 639 ntBASIC18.61■□□□□ 0.57
Pif1Q80SX8 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Pif1Q80SX8 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Pif1Q80SX8 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Pif1Q80SX8 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
Pif1Q80SX8 Gm43060-201ENSMUST00000200621 289 ntBASIC18.6■□□□□ 0.57
Pif1Q80SX8 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC18.6■□□□□ 0.57
Pif1Q80SX8 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Pif1Q80SX8 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
Pif1Q80SX8 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Pif1Q80SX8 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Pif1Q80SX8 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC18.59■□□□□ 0.57
Pif1Q80SX8 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Pif1Q80SX8 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Pif1Q80SX8 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Pif1Q80SX8 AC164883.3-201ENSMUST00000227396 1774 ntBASIC18.59■□□□□ 0.57
Pif1Q80SX8 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Pif1Q80SX8 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Pif1Q80SX8 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC18.59■□□□□ 0.57
Pif1Q80SX8 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Pif1Q80SX8 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Pif1Q80SX8 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Pif1Q80SX8 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
Pif1Q80SX8 Gm37415-201ENSMUST00000192265 2054 ntBASIC18.58■□□□□ 0.57
Pif1Q80SX8 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Pif1Q80SX8 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Pif1Q80SX8 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Pif1Q80SX8 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
Pif1Q80SX8 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Pif1Q80SX8 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
Pif1Q80SX8 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Pif1Q80SX8 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Pif1Q80SX8 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Pif1Q80SX8 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Pif1Q80SX8 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Pif1Q80SX8 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC18.57■□□□□ 0.56
Pif1Q80SX8 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Pif1Q80SX8 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Pif1Q80SX8 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
Pif1Q80SX8 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Pif1Q80SX8 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Pif1Q80SX8 Gm10493-201ENSMUST00000097270 612 ntBASIC18.56■□□□□ 0.56
Pif1Q80SX8 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
Pif1Q80SX8 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC18.56■□□□□ 0.56
Pif1Q80SX8 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
Pif1Q80SX8 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC18.55■□□□□ 0.56
Pif1Q80SX8 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Pif1Q80SX8 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Pif1Q80SX8 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Pif1Q80SX8 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC18.55■□□□□ 0.56
Pif1Q80SX8 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Pif1Q80SX8 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
Pif1Q80SX8 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC18.55■□□□□ 0.56
Pif1Q80SX8 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Pif1Q80SX8 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Pif1Q80SX8 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC18.55■□□□□ 0.56
Pif1Q80SX8 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Pif1Q80SX8 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Pif1Q80SX8 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC18.54■□□□□ 0.56
Pif1Q80SX8 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC18.54■□□□□ 0.56
Pif1Q80SX8 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Pif1Q80SX8 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Pif1Q80SX8 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 16 ms