Protein–RNA interactions for Protein: E9Q555

Rnf213, E3 ubiquitin-protein ligase RNF213, mousemouse

Known RBP Predictions only

Length 5,152 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf213E9Q555 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC10.05□□□□□ -0.8
Rnf213E9Q555 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Rnf213E9Q555 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Rnf213E9Q555 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC10.05□□□□□ -0.8
Rnf213E9Q555 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC10.05□□□□□ -0.8
Rnf213E9Q555 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Rnf213E9Q555 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC10.05□□□□□ -0.8
Rnf213E9Q555 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Rnf213E9Q555 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Rnf213E9Q555 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Rnf213E9Q555 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Rnf213E9Q555 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Rnf213E9Q555 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC10.05□□□□□ -0.8
Rnf213E9Q555 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Rnf213E9Q555 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC10.05□□□□□ -0.8
Rnf213E9Q555 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Rnf213E9Q555 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC10.05□□□□□ -0.8
Rnf213E9Q555 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC10.05□□□□□ -0.8
Rnf213E9Q555 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC10.05□□□□□ -0.8
Rnf213E9Q555 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Rnf213E9Q555 Gm42699-201ENSMUST00000198104 1657 ntBASIC10.04□□□□□ -0.8
Rnf213E9Q555 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC10.04□□□□□ -0.8
Rnf213E9Q555 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC10.04□□□□□ -0.8
Rnf213E9Q555 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Rnf213E9Q555 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Rnf213E9Q555 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC10.04□□□□□ -0.8
Rnf213E9Q555 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Rnf213E9Q555 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Rnf213E9Q555 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Rnf213E9Q555 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC10.03□□□□□ -0.8
Rnf213E9Q555 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Rnf213E9Q555 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC10.03□□□□□ -0.8
Rnf213E9Q555 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC10.03□□□□□ -0.8
Rnf213E9Q555 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Rnf213E9Q555 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Rnf213E9Q555 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC10.03□□□□□ -0.8
Rnf213E9Q555 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Rnf213E9Q555 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC10.03□□□□□ -0.8
Rnf213E9Q555 Gm715-201ENSMUST00000117865 831 ntBASIC10.03□□□□□ -0.8
Rnf213E9Q555 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC10.03□□□□□ -0.8
Rnf213E9Q555 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Rnf213E9Q555 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC10.03□□□□□ -0.8
Rnf213E9Q555 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC10.03□□□□□ -0.8
Rnf213E9Q555 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Rnf213E9Q555 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC10.03□□□□□ -0.8
Rnf213E9Q555 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC10.03□□□□□ -0.8
Rnf213E9Q555 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC10.03□□□□□ -0.8
Rnf213E9Q555 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC10.03□□□□□ -0.8
Rnf213E9Q555 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC10.02□□□□□ -0.8
Rnf213E9Q555 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC10.02□□□□□ -0.8
Rnf213E9Q555 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC10.02□□□□□ -0.8
Rnf213E9Q555 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Rnf213E9Q555 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC10.02□□□□□ -0.81
Rnf213E9Q555 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC10.02□□□□□ -0.81
Rnf213E9Q555 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC10.02□□□□□ -0.81
Rnf213E9Q555 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Rnf213E9Q555 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Rnf213E9Q555 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Rnf213E9Q555 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Rnf213E9Q555 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Rnf213E9Q555 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC10.01□□□□□ -0.81
Rnf213E9Q555 Gm10812-201ENSMUST00000099864 546 ntBASIC10.01□□□□□ -0.81
Rnf213E9Q555 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Rnf213E9Q555 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC10.01□□□□□ -0.81
Rnf213E9Q555 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC10.01□□□□□ -0.81
Rnf213E9Q555 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC10.01□□□□□ -0.81
Rnf213E9Q555 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC10.01□□□□□ -0.81
Rnf213E9Q555 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC10.01□□□□□ -0.81
Rnf213E9Q555 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC10.01□□□□□ -0.81
Rnf213E9Q555 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC10.01□□□□□ -0.81
Rnf213E9Q555 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC10.01□□□□□ -0.81
Rnf213E9Q555 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC10□□□□□ -0.81
Rnf213E9Q555 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Rnf213E9Q555 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC10□□□□□ -0.81
Rnf213E9Q555 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Rnf213E9Q555 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC10□□□□□ -0.81
Rnf213E9Q555 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC10□□□□□ -0.81
Rnf213E9Q555 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC10□□□□□ -0.81
Rnf213E9Q555 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC10□□□□□ -0.81
Rnf213E9Q555 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC10□□□□□ -0.81
Rnf213E9Q555 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Rnf213E9Q555 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC10□□□□□ -0.81
Rnf213E9Q555 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC10□□□□□ -0.81
Rnf213E9Q555 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Rnf213E9Q555 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Rnf213E9Q555 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC10□□□□□ -0.81
Rnf213E9Q555 Gm11643-201ENSMUST00000119578 864 ntBASIC10□□□□□ -0.81
Rnf213E9Q555 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC10□□□□□ -0.81
Rnf213E9Q555 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC10□□□□□ -0.81
Rnf213E9Q555 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC10□□□□□ -0.81
Rnf213E9Q555 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Rnf213E9Q555 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Rnf213E9Q555 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC9.99□□□□□ -0.81
Rnf213E9Q555 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Rnf213E9Q555 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC9.99□□□□□ -0.81
Rnf213E9Q555 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Rnf213E9Q555 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Rnf213E9Q555 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Rnf213E9Q555 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Rnf213E9Q555 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC9.99□□□□□ -0.81
Retrieved 100 of 76,532 protein–RNA pairs in 74.7 ms