Protein–RNA interactions for Protein: A0A087X179

TBC1D3E, TBC1 domain family member 3E, humanhuman

Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3EA0A087X179 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC22.58■■□□□ 1.21
TBC1D3EA0A087X179 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
TBC1D3EA0A087X179 RASA4CP-201ENST00000424092 1398 ntBASIC22.58■■□□□ 1.21
TBC1D3EA0A087X179 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC22.58■■□□□ 1.2
TBC1D3EA0A087X179 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC22.58■■□□□ 1.2
TBC1D3EA0A087X179 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
TBC1D3EA0A087X179 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC22.57■■□□□ 1.2
TBC1D3EA0A087X179 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC22.57■■□□□ 1.2
TBC1D3EA0A087X179 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
TBC1D3EA0A087X179 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
TBC1D3EA0A087X179 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC22.57■■□□□ 1.2
TBC1D3EA0A087X179 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
TBC1D3EA0A087X179 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
TBC1D3EA0A087X179 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
TBC1D3EA0A087X179 AC027682.1-201ENST00000562846 899 ntBASIC22.57■■□□□ 1.2
TBC1D3EA0A087X179 MIR3181-201ENST00000578512 73 ntBASIC22.57■■□□□ 1.2
TBC1D3EA0A087X179 CA15P2-201ENST00000611168 834 ntBASIC22.57■■□□□ 1.2
TBC1D3EA0A087X179 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
TBC1D3EA0A087X179 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
TBC1D3EA0A087X179 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC22.57■■□□□ 1.2
TBC1D3EA0A087X179 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC22.57■■□□□ 1.2
TBC1D3EA0A087X179 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
TBC1D3EA0A087X179 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
TBC1D3EA0A087X179 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC22.56■■□□□ 1.2
TBC1D3EA0A087X179 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC22.56■■□□□ 1.2
TBC1D3EA0A087X179 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC22.56■■□□□ 1.2
TBC1D3EA0A087X179 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC22.56■■□□□ 1.2
TBC1D3EA0A087X179 RARRES2P6-201ENST00000567333 442 ntBASIC22.56■■□□□ 1.2
TBC1D3EA0A087X179 AC136469.2-201ENST00000623944 1028 ntBASIC22.56■■□□□ 1.2
TBC1D3EA0A087X179 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC22.56■■□□□ 1.2
TBC1D3EA0A087X179 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
TBC1D3EA0A087X179 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
TBC1D3EA0A087X179 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC22.55■■□□□ 1.2
TBC1D3EA0A087X179 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
TBC1D3EA0A087X179 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
TBC1D3EA0A087X179 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
TBC1D3EA0A087X179 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
TBC1D3EA0A087X179 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC22.55■■□□□ 1.2
TBC1D3EA0A087X179 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC22.55■■□□□ 1.2
TBC1D3EA0A087X179 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC22.55■■□□□ 1.2
TBC1D3EA0A087X179 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC22.55■■□□□ 1.2
TBC1D3EA0A087X179 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC22.55■■□□□ 1.2
TBC1D3EA0A087X179 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
TBC1D3EA0A087X179 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC22.54■■□□□ 1.2
TBC1D3EA0A087X179 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
TBC1D3EA0A087X179 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
TBC1D3EA0A087X179 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
TBC1D3EA0A087X179 RBM38-205ENST00000440234 686 ntTSL 2 BASIC22.54■■□□□ 1.2
TBC1D3EA0A087X179 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC22.54■■□□□ 1.2
TBC1D3EA0A087X179 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC22.54■■□□□ 1.2
TBC1D3EA0A087X179 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC22.54■■□□□ 1.2
TBC1D3EA0A087X179 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC22.53■■□□□ 1.2
TBC1D3EA0A087X179 AC099791.1-201ENST00000416440 715 ntBASIC22.53■■□□□ 1.2
TBC1D3EA0A087X179 pRNA.6-201ENST00000610482 90 ntBASIC22.53■■□□□ 1.2
TBC1D3EA0A087X179 pRNA.5-201ENST00000612139 90 ntBASIC22.53■■□□□ 1.2
TBC1D3EA0A087X179 pRNA.11-201ENST00000618423 90 ntBASIC22.53■■□□□ 1.2
TBC1D3EA0A087X179 pRNA.13-201ENST00000619112 90 ntBASIC22.53■■□□□ 1.2
TBC1D3EA0A087X179 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
TBC1D3EA0A087X179 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
TBC1D3EA0A087X179 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
TBC1D3EA0A087X179 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC22.52■■□□□ 1.2
TBC1D3EA0A087X179 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC22.52■■□□□ 1.2
TBC1D3EA0A087X179 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC22.52■■□□□ 1.2
TBC1D3EA0A087X179 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
TBC1D3EA0A087X179 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
TBC1D3EA0A087X179 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC22.52■■□□□ 1.2
TBC1D3EA0A087X179 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC22.52■■□□□ 1.2
TBC1D3EA0A087X179 AC020928.2-201ENST00000588717 2197 ntBASIC22.52■■□□□ 1.2
TBC1D3EA0A087X179 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
TBC1D3EA0A087X179 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.19
TBC1D3EA0A087X179 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC22.52■■□□□ 1.19
TBC1D3EA0A087X179 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC22.51■■□□□ 1.19
TBC1D3EA0A087X179 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC22.51■■□□□ 1.19
TBC1D3EA0A087X179 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC22.51■■□□□ 1.19
TBC1D3EA0A087X179 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC22.51■■□□□ 1.19
TBC1D3EA0A087X179 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC22.51■■□□□ 1.19
TBC1D3EA0A087X179 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
TBC1D3EA0A087X179 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC22.5■■□□□ 1.19
TBC1D3EA0A087X179 AC141586.4-201ENST00000624558 1573 ntBASIC22.5■■□□□ 1.19
TBC1D3EA0A087X179 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC22.5■■□□□ 1.19
TBC1D3EA0A087X179 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC22.5■■□□□ 1.19
TBC1D3EA0A087X179 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
TBC1D3EA0A087X179 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC22.5■■□□□ 1.19
TBC1D3EA0A087X179 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC22.5■■□□□ 1.19
TBC1D3EA0A087X179 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC22.5■■□□□ 1.19
TBC1D3EA0A087X179 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC22.5■■□□□ 1.19
TBC1D3EA0A087X179 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC22.5■■□□□ 1.19
TBC1D3EA0A087X179 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC22.5■■□□□ 1.19
TBC1D3EA0A087X179 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC22.49■■□□□ 1.19
TBC1D3EA0A087X179 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC22.49■■□□□ 1.19
TBC1D3EA0A087X179 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
TBC1D3EA0A087X179 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC22.49■■□□□ 1.19
TBC1D3EA0A087X179 AC233992.3-201ENST00000607491 485 ntBASIC22.49■■□□□ 1.19
TBC1D3EA0A087X179 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
TBC1D3EA0A087X179 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
TBC1D3EA0A087X179 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
TBC1D3EA0A087X179 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC22.49■■□□□ 1.19
TBC1D3EA0A087X179 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC22.48■■□□□ 1.19
TBC1D3EA0A087X179 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC22.48■■□□□ 1.19
TBC1D3EA0A087X179 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Retrieved 100 of 98,524 protein–RNA pairs in 24 ms