Protein–RNA interactions for Protein: Q99JX1

Taf11, Transcription initiation factor TFIID subunit 11, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Taf11Q99JX1 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Taf11Q99JX1 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Taf11Q99JX1 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Taf11Q99JX1 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
Taf11Q99JX1 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Taf11Q99JX1 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Taf11Q99JX1 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Taf11Q99JX1 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Taf11Q99JX1 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Taf11Q99JX1 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
Taf11Q99JX1 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Taf11Q99JX1 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC19.21■□□□□ 0.67
Taf11Q99JX1 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Taf11Q99JX1 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Taf11Q99JX1 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
Taf11Q99JX1 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC19.21■□□□□ 0.66
Taf11Q99JX1 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Taf11Q99JX1 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Taf11Q99JX1 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Taf11Q99JX1 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Taf11Q99JX1 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Taf11Q99JX1 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Taf11Q99JX1 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC19.2■□□□□ 0.66
Taf11Q99JX1 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
Taf11Q99JX1 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Taf11Q99JX1 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
Taf11Q99JX1 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Taf11Q99JX1 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Taf11Q99JX1 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Taf11Q99JX1 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Taf11Q99JX1 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Taf11Q99JX1 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
Taf11Q99JX1 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Taf11Q99JX1 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
Taf11Q99JX1 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Taf11Q99JX1 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Taf11Q99JX1 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
Taf11Q99JX1 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Taf11Q99JX1 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Taf11Q99JX1 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
Taf11Q99JX1 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC19.19■□□□□ 0.66
Taf11Q99JX1 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Taf11Q99JX1 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Taf11Q99JX1 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Taf11Q99JX1 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC19.19■□□□□ 0.66
Taf11Q99JX1 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Taf11Q99JX1 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Taf11Q99JX1 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Taf11Q99JX1 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Taf11Q99JX1 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Taf11Q99JX1 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Taf11Q99JX1 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
Taf11Q99JX1 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
Taf11Q99JX1 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Taf11Q99JX1 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Taf11Q99JX1 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Taf11Q99JX1 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
Taf11Q99JX1 Gm5913-201ENSMUST00000119397 1399 ntBASIC19.18■□□□□ 0.66
Taf11Q99JX1 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Taf11Q99JX1 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Taf11Q99JX1 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Taf11Q99JX1 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
Taf11Q99JX1 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Taf11Q99JX1 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
Taf11Q99JX1 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
Taf11Q99JX1 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Taf11Q99JX1 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Taf11Q99JX1 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Taf11Q99JX1 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
Taf11Q99JX1 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC19.16■□□□□ 0.66
Taf11Q99JX1 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Taf11Q99JX1 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC19.16■□□□□ 0.66
Taf11Q99JX1 Gm5987-201ENSMUST00000196433 1151 ntBASIC19.16■□□□□ 0.66
Taf11Q99JX1 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Taf11Q99JX1 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Taf11Q99JX1 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Taf11Q99JX1 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
Taf11Q99JX1 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC19.16■□□□□ 0.66
Taf11Q99JX1 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
Taf11Q99JX1 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
Taf11Q99JX1 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC19.16■□□□□ 0.66
Taf11Q99JX1 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Taf11Q99JX1 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Taf11Q99JX1 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
Taf11Q99JX1 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
Taf11Q99JX1 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
Taf11Q99JX1 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC19.15■□□□□ 0.66
Taf11Q99JX1 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
Taf11Q99JX1 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Taf11Q99JX1 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Taf11Q99JX1 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Taf11Q99JX1 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
Taf11Q99JX1 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Taf11Q99JX1 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Taf11Q99JX1 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
Taf11Q99JX1 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC19.14■□□□□ 0.65
Taf11Q99JX1 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Taf11Q99JX1 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Taf11Q99JX1 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
Taf11Q99JX1 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 23.6 ms