Protein–RNA interactions for Protein: P01139

Ngf, Beta-nerve growth factor, mousemouse

Predictions only

Length 241 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NgfP01139 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
NgfP01139 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC18.13■□□□□ 0.49
NgfP01139 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
NgfP01139 Gm5297-201ENSMUST00000198555 1171 ntBASIC18.13■□□□□ 0.49
NgfP01139 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
NgfP01139 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
NgfP01139 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
NgfP01139 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
NgfP01139 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
NgfP01139 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
NgfP01139 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
NgfP01139 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
NgfP01139 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC18.12■□□□□ 0.49
NgfP01139 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC18.12■□□□□ 0.49
NgfP01139 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC18.12■□□□□ 0.49
NgfP01139 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC18.12■□□□□ 0.49
NgfP01139 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
NgfP01139 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
NgfP01139 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
NgfP01139 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC18.12■□□□□ 0.49
NgfP01139 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
NgfP01139 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
NgfP01139 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
NgfP01139 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
NgfP01139 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
NgfP01139 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
NgfP01139 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC18.11■□□□□ 0.49
NgfP01139 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC18.11■□□□□ 0.49
NgfP01139 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
NgfP01139 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
NgfP01139 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
NgfP01139 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
NgfP01139 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC18.1■□□□□ 0.49
NgfP01139 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
NgfP01139 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC18.1■□□□□ 0.49
NgfP01139 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
NgfP01139 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
NgfP01139 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC18.1■□□□□ 0.49
NgfP01139 AC164629.5-201ENSMUST00000220387 632 ntBASIC18.1■□□□□ 0.49
NgfP01139 Gm40848-201ENSMUST00000221998 324 ntBASIC18.1■□□□□ 0.49
NgfP01139 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
NgfP01139 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
NgfP01139 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
NgfP01139 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
NgfP01139 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
NgfP01139 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
NgfP01139 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
NgfP01139 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
NgfP01139 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
NgfP01139 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
NgfP01139 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
NgfP01139 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
NgfP01139 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.49
NgfP01139 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC18.08■□□□□ 0.48
NgfP01139 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC18.08■□□□□ 0.48
NgfP01139 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC18.08■□□□□ 0.48
NgfP01139 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC18.08■□□□□ 0.48
NgfP01139 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
NgfP01139 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
NgfP01139 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
NgfP01139 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
NgfP01139 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
NgfP01139 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
NgfP01139 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC18.07■□□□□ 0.48
NgfP01139 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
NgfP01139 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
NgfP01139 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC18.07■□□□□ 0.48
NgfP01139 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
NgfP01139 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
NgfP01139 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
NgfP01139 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
NgfP01139 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
NgfP01139 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
NgfP01139 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
NgfP01139 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
NgfP01139 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
NgfP01139 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
NgfP01139 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
NgfP01139 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC18.06■□□□□ 0.48
NgfP01139 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
NgfP01139 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC18.06■□□□□ 0.48
NgfP01139 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
NgfP01139 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC18.05■□□□□ 0.48
NgfP01139 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
NgfP01139 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
NgfP01139 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
NgfP01139 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
NgfP01139 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
NgfP01139 AC165080.2-201ENSMUST00000217491 1530 ntBASIC18.05■□□□□ 0.48
NgfP01139 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
NgfP01139 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC18.05■□□□□ 0.48
NgfP01139 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC18.05■□□□□ 0.48
NgfP01139 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
NgfP01139 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
NgfP01139 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
NgfP01139 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC18.05■□□□□ 0.48
NgfP01139 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
NgfP01139 Gm10129-202ENSMUST00000193100 1316 ntBASIC18.04■□□□□ 0.48
NgfP01139 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
NgfP01139 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 56.7 ms