Protein–RNA interactions for Protein: Q3TR08

Fndc4, Fibronectin type III domain-containing protein 4, mousemouse

Predictions only

Length 231 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fndc4Q3TR08 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Fndc4Q3TR08 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Fndc4Q3TR08 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Fndc4Q3TR08 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Fndc4Q3TR08 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Fndc4Q3TR08 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Fndc4Q3TR08 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
Fndc4Q3TR08 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Fndc4Q3TR08 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Fndc4Q3TR08 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Fndc4Q3TR08 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Fndc4Q3TR08 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Fndc4Q3TR08 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC17.28■□□□□ 0.36
Fndc4Q3TR08 Gm5921-201ENSMUST00000075898 882 ntBASIC17.28■□□□□ 0.36
Fndc4Q3TR08 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Fndc4Q3TR08 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Fndc4Q3TR08 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Fndc4Q3TR08 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC17.27■□□□□ 0.36
Fndc4Q3TR08 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC17.27■□□□□ 0.36
Fndc4Q3TR08 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.36
Fndc4Q3TR08 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Fndc4Q3TR08 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC17.27■□□□□ 0.35
Fndc4Q3TR08 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Fndc4Q3TR08 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Fndc4Q3TR08 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Fndc4Q3TR08 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Fndc4Q3TR08 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Fndc4Q3TR08 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Fndc4Q3TR08 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Fndc4Q3TR08 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC17.26■□□□□ 0.35
Fndc4Q3TR08 Nsd1-203ENSMUST00000224156 1149 ntBASIC17.26■□□□□ 0.35
Fndc4Q3TR08 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Fndc4Q3TR08 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Fndc4Q3TR08 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Fndc4Q3TR08 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Fndc4Q3TR08 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Fndc4Q3TR08 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Fndc4Q3TR08 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC17.25■□□□□ 0.35
Fndc4Q3TR08 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Fndc4Q3TR08 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Fndc4Q3TR08 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC17.25■□□□□ 0.35
Fndc4Q3TR08 Gm45444-201ENSMUST00000211394 898 ntBASIC17.25■□□□□ 0.35
Fndc4Q3TR08 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
Fndc4Q3TR08 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Fndc4Q3TR08 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC17.25■□□□□ 0.35
Fndc4Q3TR08 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Fndc4Q3TR08 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Fndc4Q3TR08 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Fndc4Q3TR08 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC17.25■□□□□ 0.35
Fndc4Q3TR08 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Fndc4Q3TR08 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Fndc4Q3TR08 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Fndc4Q3TR08 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Fndc4Q3TR08 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC17.24■□□□□ 0.35
Fndc4Q3TR08 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC17.24■□□□□ 0.35
Fndc4Q3TR08 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
Fndc4Q3TR08 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Fndc4Q3TR08 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC17.24■□□□□ 0.35
Fndc4Q3TR08 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Fndc4Q3TR08 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Fndc4Q3TR08 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC17.23■□□□□ 0.35
Fndc4Q3TR08 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Fndc4Q3TR08 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
Fndc4Q3TR08 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Fndc4Q3TR08 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Fndc4Q3TR08 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Fndc4Q3TR08 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Fndc4Q3TR08 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC17.23■□□□□ 0.35
Fndc4Q3TR08 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Fndc4Q3TR08 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Fndc4Q3TR08 Snhg20-203ENSMUST00000182811 2153 ntBASIC17.22■□□□□ 0.35
Fndc4Q3TR08 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Fndc4Q3TR08 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
Fndc4Q3TR08 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Fndc4Q3TR08 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Fndc4Q3TR08 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Fndc4Q3TR08 AC158990.1-201ENSMUST00000221450 2016 ntBASIC17.21■□□□□ 0.35
Fndc4Q3TR08 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Fndc4Q3TR08 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Fndc4Q3TR08 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Fndc4Q3TR08 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Fndc4Q3TR08 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Fndc4Q3TR08 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC17.21■□□□□ 0.35
Fndc4Q3TR08 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Fndc4Q3TR08 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Fndc4Q3TR08 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Fndc4Q3TR08 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Fndc4Q3TR08 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Fndc4Q3TR08 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Fndc4Q3TR08 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
Fndc4Q3TR08 Gm8093-201ENSMUST00000128935 1892 ntBASIC17.2■□□□□ 0.34
Fndc4Q3TR08 Gm43403-201ENSMUST00000198011 1786 ntBASIC17.2■□□□□ 0.34
Fndc4Q3TR08 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Fndc4Q3TR08 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
Fndc4Q3TR08 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC17.2■□□□□ 0.34
Fndc4Q3TR08 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC17.2■□□□□ 0.34
Fndc4Q3TR08 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Fndc4Q3TR08 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC17.2■□□□□ 0.34
Fndc4Q3TR08 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Fndc4Q3TR08 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 51.3 ms